fix(twins): interval-based histogram/waveform matching in find_twins (#102 sub-task 2)
A real trigger is recorded twice — as a triggered waveform (stamped at the trigger instant) and inside the scheduled histogram whose interval contains it (stamped at the 7am/7pm interval start). The two twins routinely differ by HOURS, so the old ±5-minute window in find_twins silently missed them — which broke review propagation (flagging one twin left its twin unflagged). Twins are now matched by: same serial + identical peak_vector_sum + OPPOSITE record type + the waveform's timestamp falling within the histogram's interval (bounded by the next same-serial histogram). Matching keys off record timestamps (not call-in/received times, which drift with field connectivity). window_seconds is retained but ignored. Rewrote test_find_twins + test_twin_propagation for the new contract (incl. the 75-min-apart UM12947 case, cross-type exclusion, containing-interval selection, open-ended latest interval). Full suite: 264 passed; the 16 failures are pre-existing (missing gitignored fixtures + a v0.26.0 codec case), unchanged from baseline. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01YDXjZCr4RqT2U3QvMDhgzf
This commit is contained in:
@@ -6,6 +6,17 @@ All notable changes to seismo-relay are documented here.
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## [Unreleased]
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### Fixed
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- **Histogram/waveform twin matching is now interval-based** (`find_twins`). A real
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trigger is recorded twice — as a triggered waveform (stamped at the trigger instant)
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and inside the scheduled histogram whose interval contains it (stamped at the 7am/7pm
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interval start) — so the two twins can be **hours apart**. The old ±5-minute window
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silently missed them, which broke review propagation (flagging one twin didn't flag its
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twin). Twins are now matched by same serial + identical `peak_vector_sum` + opposite
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record type + the waveform falling within the histogram's interval (bounded by the next
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same-serial histogram). `window_seconds` is retained but ignored. Fixes terra-view #102
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sub-task 2.
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---
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## v0.26.0 — 2026-08-27
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+83
-32
@@ -603,56 +603,107 @@ class SeismoDb:
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).fetchall()
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return [dict(r) for r in rows]
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def find_twins(self, event_id: str, *, window_seconds: int = 300) -> list[dict]:
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def find_twins(self, event_id: str, *, window_seconds: int | None = None) -> list[dict]:
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"""
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Find this event's histogram/waveform twin(s): rows sharing the same
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serial and an identical peak_vector_sum, whose timestamp falls
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within ``window_seconds`` of this event's timestamp. Excludes the
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event itself. Returns [] if the event or any required field
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(serial / peak_vector_sum / timestamp) is missing.
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Find this event's histogram/waveform twin(s): the SAME physical event
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recorded both as a scheduled histogram and as a triggered waveform.
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Caveat: identical-PVS matching is a proxy for "same physical event
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recorded twice," not a guarantee. In the rare case where the device
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clamps/saturates PVS (clamped to sqrt(3) * geo_range), two distinct
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saturated events on the same serial within the window can share the
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same clamped PVS value and be matched as twins even though they are
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different events. This is harmless in practice — false_trigger/
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reviewed_real are derived/index columns re-derivable from the
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sidecar source of truth — but worth knowing if twin counts look
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surprising on a saturated/clamped run.
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A real trigger is captured twice — once as a triggered waveform (stamped
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at the trigger instant) and once inside the scheduled histogram whose
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interval contains it (stamped at the histogram's interval start, e.g. the
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7am/7pm call-in). The two can be HOURS apart in time yet report the same
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serial and identical peak_vector_sum. Twins are therefore matched by:
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* same serial,
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* identical peak_vector_sum,
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* OPPOSITE record type (one histogram, one waveform), and
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* the waveform's timestamp falls within the histogram's interval —
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from a histogram's timestamp up to the next histogram (same serial).
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This replaces the old ±``window_seconds`` heuristic, which silently
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missed twins more than a few minutes apart (a histogram's interval-start
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stamp and the trigger instant routinely differ by hours). ``window_seconds``
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is still accepted for backward compatibility but is ignored.
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Returns [] if the event or a required field (serial / peak_vector_sum /
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timestamp) is missing.
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Caveat: identical-PVS matching remains a proxy for "same physical event"
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— if the device clamps/saturates PVS (to sqrt(3) * geo_range), two
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distinct saturated events could share a PVS. The added opposite-type and
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interval constraints make a false pairing far less likely than the old
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time-window match, and false_trigger/reviewed_real stay re-derivable from
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the sidecar source of truth.
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"""
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def _parse(ts):
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if not ts:
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return None
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try:
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return datetime.datetime.fromisoformat(str(ts).replace(" ", "T"))
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except ValueError:
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return None
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def _is_hist(rt):
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return str(rt or "").lower().startswith("hist")
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row = self.get_event(event_id)
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if not row:
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return []
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serial = row.get("serial"); pvs = row.get("peak_vector_sum"); ts = row.get("timestamp")
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if serial is None or pvs is None or not ts:
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serial = row.get("serial"); pvs = row.get("peak_vector_sum")
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t_target = _parse(row.get("timestamp"))
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if serial is None or pvs is None or t_target is None:
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return []
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try:
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t = datetime.datetime.fromisoformat(ts.replace(" ", "T"))
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except ValueError:
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return []
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lo = (t - datetime.timedelta(seconds=window_seconds)).isoformat()
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hi = (t + datetime.timedelta(seconds=window_seconds)).isoformat()
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with self._connect() as conn:
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rows = conn.execute(
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"SELECT * FROM events WHERE serial=? AND id!=? AND peak_vector_sum=? "
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"AND timestamp BETWEEN ? AND ?",
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(serial, event_id, pvs, lo, hi),
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).fetchall()
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return [dict(r) for r in rows]
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target_hist = _is_hist(row.get("record_type"))
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def propagate_review_to_twins(self, event_id: str, *, window_seconds: int = 300) -> list[str]:
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with self._connect() as conn:
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cand_rows = [dict(r) for r in conn.execute(
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"SELECT * FROM events WHERE serial=? AND id!=? AND peak_vector_sum=?",
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(serial, event_id, pvs)).fetchall()]
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hist_ts = [r["timestamp"] for r in conn.execute(
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"SELECT timestamp FROM events WHERE serial=? AND lower(record_type) LIKE 'hist%'",
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(serial,)).fetchall()]
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# Histogram interval-start times for this serial, sorted, to bound intervals.
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starts = sorted(x for x in (_parse(t) for t in hist_ts) if x is not None)
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def _interval_end(h_start):
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# The next histogram strictly after h_start bounds the interval; else open-ended.
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for x in starts:
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if x > h_start:
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return x
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return None
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def _covers(h_start, w_time):
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end = _interval_end(h_start)
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return h_start <= w_time and (end is None or w_time < end)
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twins = []
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for c in cand_rows:
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if _is_hist(c.get("record_type")) == target_hist:
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continue # twins are strictly cross-type (one histogram, one waveform)
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c_time = _parse(c.get("timestamp"))
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if c_time is None:
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continue
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h_start, w_time = (t_target, c_time) if target_hist else (c_time, t_target)
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if _covers(h_start, w_time):
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twins.append(c)
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return twins
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def propagate_review_to_twins(self, event_id: str, *, window_seconds: int | None = None) -> list[str]:
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"""
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Copy this event's `false_trigger`/`reviewed_real` columns onto each
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of its histogram/waveform twins (see `find_twins`), so flagging one
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twin flags both. Returns the list of twin ids updated.
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``window_seconds`` is accepted for backward compatibility but ignored;
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twin matching is now interval-based (see `find_twins`).
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"""
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row = self.get_event(event_id)
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if not row:
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return []
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ft = 1 if row.get("false_trigger") else 0
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real = 1 if row.get("reviewed_real") else 0
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twins = self.find_twins(event_id, window_seconds=window_seconds)
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twins = self.find_twins(event_id)
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moved = []
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with self._connect() as conn:
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for tw in twins:
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+57
-19
@@ -1,33 +1,71 @@
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import datetime
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import sqlite3
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from sfm.database import SeismoDb
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from minimateplus.models import Event, Timestamp
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def _ins(db, key, serial, pvs, ts):
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def _ins(db, key, serial, pvs, ts, record_type="Waveform"):
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ev = Event(index=0)
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ev._waveform_key = bytes.fromhex(key)
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ev.timestamp = ts
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# peak_vector_sum comes from peak_values; simplest: insert then UPDATE pvs directly
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db.insert_events([ev], serial=serial)
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row = [r for r in db.query_events(serial=serial) if r["waveform_key"] == key][0]
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import sqlite3
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with sqlite3.connect(db.db_path) as c:
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c.execute("UPDATE events SET peak_vector_sum=? WHERE id=?", (pvs, row["id"]))
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c.execute("UPDATE events SET peak_vector_sum=?, record_type=? WHERE id=?",
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(pvs, record_type, row["id"]))
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return row["id"]
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def test_find_twins_matches_same_serial_pvs_near_time(tmp_path):
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def _ts(hour, minute, second=0, day=25):
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return Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=day,
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hour=hour, minute=minute, second=second)
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def test_histogram_and_waveform_twin_across_hours(tmp_path):
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# The real UM12947 case: histogram stamped at its 7pm interval start, the
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# triggered waveform 75 min later — same serial + identical PVS. The old
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# ±5-min window missed this; interval matching catches it, both directions.
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db = SeismoDb(tmp_path / "s.db")
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base = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=5)
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twin = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=45)
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far = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=21, minute=0, second=0)
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# d needs a timestamp distinct from `twin` (UNIQUE(serial, timestamp) would
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# otherwise collide with b and UPSERT onto its row instead of inserting a
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# new one) while staying near `base` in time.
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near = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=44)
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a = _ins(db, "01110001", "BE1", 0.4763, base)
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b = _ins(db, "01110002", "BE1", 0.4763, twin) # twin: same serial+pvs, 40s apart
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c = _ins(db, "01110003", "BE1", 0.4763, far) # same pvs but >window away
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d = _ins(db, "01110004", "BE1", 0.9999, near) # near time but different pvs
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ids = {r["id"] for r in db.find_twins(a, window_seconds=300)}
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assert ids == {b}
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hist_pm = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 31, 17), "Histogram")
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wave = _ins(db, "01110002", "BE1", 0.4763, _ts(20, 46, 44), "Waveform")
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_ins(db, "01110003", "BE1", 0.0100, _ts(7, 0, 0, day=26), "Histogram") # bounds the interval
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assert {r["id"] for r in db.find_twins(hist_pm)} == {wave}
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assert {r["id"] for r in db.find_twins(wave)} == {hist_pm}
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def test_same_type_not_twinned(tmp_path):
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# Two waveforms, same serial + PVS, seconds apart → NOT twins (cross-type only).
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db = SeismoDb(tmp_path / "s.db")
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a = _ins(db, "01110001", "BE1", 0.4763, _ts(20, 19, 5), "Waveform")
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_ins(db, "01110002", "BE1", 0.4763, _ts(20, 19, 45), "Waveform")
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assert db.find_twins(a) == []
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def test_waveform_matches_only_the_containing_interval(tmp_path):
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# Two overnight intervals with the same PVS; a waveform in the SECOND interval
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# must twin with that histogram, never the first — even though PVS matches both.
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db = SeismoDb(tmp_path / "s.db")
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h1 = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 0, 0, day=25), "Histogram")
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h2 = _ins(db, "01110002", "BE1", 0.4763, _ts(7, 0, 0, day=26), "Histogram")
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w = _ins(db, "01110003", "BE1", 0.4763, _ts(8, 0, 0, day=26), "Waveform")
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assert {r["id"] for r in db.find_twins(w)} == {h2}
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assert w not in {r["id"] for r in db.find_twins(h1)}
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def test_different_pvs_not_twinned(tmp_path):
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db = SeismoDb(tmp_path / "s.db")
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h = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 0, 0), "Histogram")
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_ins(db, "01110002", "BE1", 0.9999, _ts(20, 0, 0), "Waveform") # different PVS
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assert db.find_twins(h) == []
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def test_open_ended_latest_interval(tmp_path):
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# A waveform after the latest histogram (nothing bounds the interval) still twins.
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db = SeismoDb(tmp_path / "s.db")
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h = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 0, 0), "Histogram")
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w = _ins(db, "01110002", "BE1", 0.4763, _ts(23, 30, 0), "Waveform")
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assert {r["id"] for r in db.find_twins(h)} == {w}
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def test_missing_fields_returns_empty(tmp_path):
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db = SeismoDb(tmp_path / "s.db")
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assert db.find_twins("nonexistent-id") == []
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@@ -3,31 +3,34 @@ from sfm.database import SeismoDb
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from minimateplus.models import Event, Timestamp
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def _ins(db, key, serial, pvs, ts):
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def _ins(db, key, serial, pvs, ts, record_type="Waveform"):
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ev = Event(index=0)
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ev._waveform_key = bytes.fromhex(key)
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ev.timestamp = ts
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# peak_vector_sum comes from peak_values; simplest: insert then UPDATE pvs directly
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db.insert_events([ev], serial=serial)
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row = [r for r in db.query_events(serial=serial) if r["waveform_key"] == key][0]
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with sqlite3.connect(db.db_path) as c:
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c.execute("UPDATE events SET peak_vector_sum=? WHERE id=?", (pvs, row["id"]))
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c.execute("UPDATE events SET peak_vector_sum=?, record_type=? WHERE id=?",
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(pvs, record_type, row["id"]))
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return row["id"]
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def test_propagate_copies_flags_to_twins(tmp_path):
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def _ts(hour, minute, second=0, day=25):
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return Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=day,
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hour=hour, minute=minute, second=second)
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def test_propagate_copies_flags_across_hours_apart_twins(tmp_path):
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# Flagging the waveform FT propagates to its histogram twin 75 min earlier
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# (the interval matcher pairs them; the old ±5-min window would have missed it).
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db = SeismoDb(tmp_path / "s.db")
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base = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=5)
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twin = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=45)
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other = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=44)
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hist = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 31, 17), "Histogram")
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wave = _ins(db, "01110002", "BE1", 0.4763, _ts(20, 46, 44), "Waveform") # twin, 75 min later
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other = _ins(db, "01110003", "BE1", 0.9999, _ts(20, 20, 0), "Waveform") # different pvs
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primary_id = _ins(db, "01110001", "BE1", 0.4763, base)
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twin_id = _ins(db, "01110002", "BE1", 0.4763, twin) # twin: same serial+pvs, 40s apart
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non_twin_id = _ins(db, "01110003", "BE1", 0.9999, other) # near time but different pvs
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db.update_event_review(wave, {"false_trigger": True})
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moved = db.propagate_review_to_twins(wave)
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db.update_event_review(primary_id, {"false_trigger": True})
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moved = db.propagate_review_to_twins(primary_id)
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assert twin_id in moved
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assert db.get_event(twin_id)["false_trigger"] == 1
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assert db.get_event(non_twin_id)["false_trigger"] == 0
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assert hist in moved
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assert db.get_event(hist)["false_trigger"] == 1
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assert db.get_event(other)["false_trigger"] == 0
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Reference in New Issue
Block a user