18 Commits
Author SHA1 Message Date
serversdownandClaude Opus 5 9ceff65bfb fix(sfm): read the serial family prefix from the file, enabling BlastMates
The BW filename encodes only the serial NUMBER — `<letter><3 digits>`, so
`L895…` is 10895 and nothing more. The two-letter family prefix is not in it:
"BE" is a MiniMate Plus, "BA" a BlastMate. Both are Series III and their
files are byte-identical in every way that matters — all 1,493 BlastMate
binaries in the DL2 archive decode through the existing codec at 100%, same
four channels — so the serial string was the only thing standing between SFM
and BlastMate support.

Two sites synthesised the prefix and got it wrong:

- waveform_store `_serial_from_bw_filename` returned f"BE{num}" on import, so
  a BlastMate event was filed under a unit that does not exist, silently, and
  Terra-View read it straight through. Split into
  `_serial_number_from_bw_filename` (the number, which the filename really
  does carry) and a new `_serial_from_bw_bytes` that reads the serial out of
  the body and accepts it only when its numeric part agrees with the
  filename. save_imported_bw now prefers hint -> body -> filename guess.
  Verified against real archive bytes for BA9229, BA10060, BA10895, BA15957
  and BE9558/BE11529/BE18003.

- client `_decode_0a_partial_header` searched for a literal b"BE" in the
  monitor-log partial record. On a BlastMate that returns -1 and skips the
  whole block, so the geo threshold went missing along with the serial. Now
  matches any two-letter prefix, and requires the NUL terminator — stricter
  than the bare two-byte search it replaces.

Nothing to migrate: no BlastMate events are in prod. The archive's BA units
last recorded 2018-10 (BA9229, BA15957), 2023-08 (BA10895) and 2023-11
(BA10060), and the prod backfill only reaches back to ~May 2025.

21 tests. Suite: 309 passed, same 16 pre-existing failures as at HEAD
(15 missing ASCII fixtures + one peak_values assertion, all untouched here).

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-09-06 07:58:00 +00:00
serversdownandClaude Opus 5 9982938b0b fix(offset): read the real serial from the file body, not "BE" + the number
The BW filename encodes only the serial NUMBER — `<letter><3 digits>` where
letter = chr(ord('B') + serial // 1000), so `L895…` decodes to 10895. The
two-letter family prefix is not in the filename at all, and every offset
scanner synthesized it as f"BE{num}".

Four of the 43 archive units are BA, not BE. Their binaries say so plainly:
BA9229, BA10060, BA10895, BA15957. Brian caught BA10895 by recognising that
no such unit as BE10895 exists.

serial_of() now reads the serial string out of the file body and falls back
to the old synthesis only when no matching string is found. No analysis
changes: grouping was by the numeric part, which was always correct, and no
unit number maps to more than one serial (checked across all 43).

The same assumption is live in two production sites and is NOT touched here,
because fixing ingest renames rows a running store and Terra-View already
reads them:
  - sfm/waveform_store.py:870  `return f"BE{serial_num}"` on import
  - minimateplus/client.py:2538 `raw_data.find(b"BE")` in the monitor-log
    partial-record decode, which yields serial=None on a BA unit

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-09-06 07:48:54 +00:00
serversdownandClaude Opus 5 1daf693b32 feat(offset): scan the histogram corpus — the other 90% of the archive
offset_scan3.py covers only waveforms (6,577 unique binaries). The archive
also holds 63,535 unique histograms, which the pre-trigger method cannot
touch: a histogram carries no samples, only a per-interval per-channel peak.

scratch/offset_hist_scan.py scans them — 63,505/63,535 decoded (99.95%),
43 units, 77.9M intervals. It emits every candidate floor statistic per
(file, channel) rather than deciding anything, so thresholds get calibrated
against the waveform ground truth instead of guessed.

Journal §8b records the outcome. What survives is a site-quiet-gated
cross-channel differential that independently confirms BE18438|Vert and
BE9558|Tran+Long with a clean 2.5x separation gap and 0.037% day-level false
alarm, threshold-insensitive across a 2.3x span — the first operating point
in this investigation to pass that test cleanly.

What it does not do, recorded just as plainly: it finds 2 of the 5 confirmed
units, not 5. DC leakage into the interval peak is bimodal (0.9 on BE18438,
0.02 on BE12599), so a negative histogram result is not evidence of health.
Per-channel attribution is not established (channel-scramble p = 0.769) and
timing resolves to ~a month, not a day.

Two dead ends buried for good: the absolute floor is retired (66% of its
discrimination is a day/site confound), and zero-fraction is structurally
impossible — the device clamps every interval peak at >= 1 A/D count.

Two findings independent of the histograms:
- offset_scan3's spread<=0.02 gate discards 18.8% of rows with |pre|>=0.025,
  concentrated on 41 unit-channels currently labelled clean; 4 would be
  sustained positives without it. The fleet label is three-state, not two.
- The waveform corpus observes ~7% of the days a unit was deployed.

BE10895 is reclassified from transient to a genuine Vert fault of a different
subtype: 49.4% single-axis-dominant events, the highest in the fleet, all on
Vert. The other six marginal units are clean.

Not done: the 11 thin-coverage units were not screened, and no completeness
audit was run.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-09-05 02:08:36 +00:00
serversdownandClaude Opus 4.8 523f22c96b Merge feat/ft-reason: optional false_trigger_reason (offset) FT subtype
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01YDXjZCr4RqT2U3QvMDhgzf
2026-09-04 21:12:04 +00:00
serversdownandClaude Opus 4.8 cfdd153b5a docs(changelog): false_trigger_reason column under [Unreleased]
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01YDXjZCr4RqT2U3QvMDhgzf
2026-09-03 21:08:04 +00:00
serversdownandClaude Opus 4.8 c0cf6547d9 feat(ft): optional false_trigger_reason ("offset" etc.) as an FT subtype
A reason records *why* an event is a false trigger. It is optional (plain
FT flags still record no reason) and is a subtype of the FT flag: setting a
reason implies false_trigger=1, and the reason is cleared whenever FT ends
up 0 (confirm-real, clear-FT, set_false_trigger(false)). Twin propagation
carries the reason to the histogram/waveform twin alongside the FT flag.

New nullable `false_trigger_reason TEXT` column (schema + _migrate ADD
COLUMN only — not the Migration-1 rebuild). 7 tests.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01YDXjZCr4RqT2U3QvMDhgzf
2026-09-03 20:53:57 +00:00
serversdownandClaude Opus 4.8 4cf0fda804 chore(release): v0.28.0 — offset (DC-baseline) false-trigger detector
Bumps TOOL_VERSION 0.27.0 -> 0.28.0 (drives the SFM /health + OpenAPI version
too). Rolls CHANGELOG [Unreleased] -> v0.28.0.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01YDXjZCr4RqT2U3QvMDhgzf
2026-09-02 04:55:42 +00:00
serversdownandClaude Opus 4.8 3554d00583 feat(offset): DC-offset detector productionized into the shape pipeline
Productionizes the validated scratch/offset_scan3.py: a DC offset (baseline
shifted off zero — sensor bumped/settled/drifted) is |median(pre-trigger)| >= 5
counts (0.025 in/s) AND flat across pre/mid/end thirds (spread <= 0.02); a
transient moves one third and is rejected by the spread test.

- shape_metrics: offset_from_samples / offset_from_h5 (reads .h5 samples +
  pretrig_samples attr; range-aware via the .h5's in/s float samples)
- events schema: shape_offset / _axis / _pre / _spread (via _SCHEMA + the
  _migrate ADD COLUMN loop only; NOT the Migration-1 rebuild), threaded through
  insert + upsert mirroring shape_*
- ingest: computed at all three waveform_store save paths alongside shape
- backfill_event_shape: also computes + stores (and stale-clears) offset
- exposed via /db/events automatically (SELECT *)

Gating to waveforms is done downstream in terra-view ft_suspicion (mirrors how
shape is ignored for histograms), not at the SFM call sites. 13 new tests.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01YDXjZCr4RqT2U3QvMDhgzf
2026-09-02 04:47:01 +00:00
serversdownandClaude Opus 5 b29ca50b35 docs: point CLAUDE.md at the shared stack context doc
The stack-level context (version pairing across seismo-relay / Terra-View /
SLMM, and which repo a change belongs in) now lives version-controlled at
terra-view/docs/tmi-stack.md, symlinked as ~/CLAUDE.md. Reference it here so
the three project docs are symmetric.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-08-29 07:53:04 +00:00
serversdownandClaude Opus 5 e07f76dd31 docs: correct the v0.27.0 backfill claim — prod needs no backfill
The v0.27.0 notes said prod held 4 histograms that would stay empty until a
backfill. That was wrong, and asserted without checking.

Verified: all four recovered files (K440HJCN.3C0H, K557IF1U.8K0H,
T191HVNP.0S0H, T193L0XM.CI0H) are archive-only — none appears in the production
store or the events DB. Re-running stride detection over the prod store's
10,215 histogram binaries under both the old and new code shows 0 files whose
decode changes.

So the partial-final-block fix is forward-looking: it matters for future
ingests of sub-minute histograms with a partial final block, not for anything
already stored.

TOOL_VERSION still moves with the release, so a future backfill run will
regenerate the whole store instead of skipping. Harmless — byte-identical
output for every stored file — but it costs the full ~2 hours on the NAS, so
it should not be started casually.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-08-29 06:12:19 +00:00
serversdownandClaude Opus 5 8e808b09d4 chore(release): v0.27.0 — decoder verified at scale; offset investigation
Bumps pyproject, TOOL_VERSION, README and CLAUDE.md to 0.27.0. sfm/server.py
now derives its version from TOOL_VERSION (c8c4ec2), so that constant is the
single source of truth for the service version and the sidecar stamp alike.

What ships:
  - histogram partial-final-block fix (4 files recovered, 0 regressed)
  - interval-based find_twins matching (terra-view #102 sub-task 2)
  - /health no longer reports a hard-coded 0.1.0
  - 793 NUL bytes stripped from CLAUDE.md (made grep skip it as binary)
  - docs/offset_investigation.md, and the offset detectors
  - scratch/verify_against_ascii.py

Verification: the series-3 codec now decodes 14,338 / 14,338 archive pairs
exactly against their Blastware ASCII exports (1,249 waveform + 13,089
histogram, 45 units, back to 2018) — 11x the ground truth the prod store
carried, and it supersedes the old "per-sample on 11% of files" caveat.

Independent check on the scale: 19,244 healthy channel-events sit at a
pre-trigger floor of exactly 0.000 (62.7%), 94.5% within one quantisation
unit, median +0.0000. No zero-point bias in the decoder.

⚠ TOOL_VERSION moved, so the next prod backfill regenerates the whole store
(~2 hours on the NAS). That is intended — it is what publishes the 4 recovered
histograms — but it is not a no-op; schedule it.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-08-28 22:21:47 +00:00
serversdownandClaude Opus 5 ad84a04404 feat(offset): detector v3 — pre-trigger floor with a constant-floor test
Brian's method, and better than v2's whole-record median: the pre-trigger
window is definitionally quiet (the buffer captured before the trigger fired),
whereas a median is merely robust to the event. Requiring the floor to hold
across pre-trigger / middle / end rejects transients that a median cannot.

    per channel:  pre/mid/end medians, spread = max - min
    offset when   |pre| >= floor AND spread <= 0.02 in/s
    real fault    >= 3 consecutive flagged events on that channel

The empirical noise floor justifies the threshold and validates the decoder:
across 19,244 non-flagged channel-events the pre-trigger floor is 62.7% exactly
0.000, 94.5% within +/-1 quantisation unit, median +0.0000, mean -0.0008. There
is no systematic zero-point bias — an independent confirmation of the
32000-count geo scale.

The result is threshold-insensitive across a 2x range (0.020 to 0.040 in/s),
which is what separates a real signal from a tuned one:

  FINAL: 5 of 45 units (11%) — BE9558, BE11529, BE12599, BE13117, BE18438

BE11007 and BE10895 drop out; the spread test identifies them as transients
rather than pedestals. v1's 11% headline was right by luck — it included
BE11007 and named the wrong channel on most units.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-08-28 21:18:33 +00:00
serversdownandClaude Opus 5 1fdc665675 fix(offset): retract the v1 detector — per-channel median, not dominant-axis mean
Brian challenged the v1 finding that offsets "come and go", against field
experience that a unit which develops one stays broken until the geophone is
replaced. He was right; v1 had two flaws, both of which manufactured false
recoveries:

1. It scored only the axis with the largest peak, so a real event on one axis
   hid a persistent pedestal on another. BE12599 on 2026-08-21 read "clean"
   because Long had a 1.065 in/s event, while Tran sat at +0.4732 in/s and was
   never examined.
2. It used the mean, which a real transient perturbs. The median is the resting
   baseline and a blast does not move it. Same event, Long channel:
   mean +0.0783 vs median -0.0050.

offset_scan2.py flags a CHANNEL when |median| >= 0.025 in/s (5 A/D counts,
Instantel's own criterion) and treats >=3 consecutive flagged events as the
real signal. No m/p ratio guard is needed — that existed only to compensate for
the mean.

Corrected results:
  units with any flagged event        6 -> 19 of 45
  units with a sustained pedestal     8 of 45 (18%)
  runs >=3 consecutive                29;  1-2 event runs (noise) 69

Also corrected: the affected channel is most often Vert, not Tran (v1 named
whichever axis had the largest peak, so it was frequently wrong). BE10895 and
BE18003 were invisible to v1. BE12599's fault began 2026-08-14, not 08-17.

The decode itself was never in question and is confirmed against Blastware's
own ASCII export: on K558LJN3.BK0W, BW shows Tran parked at +0.265..+0.375 in/s
for the entire record while Vert and Long sit at ~0.005 — Instantel's "parallel
lines above or below the zero line".

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-08-28 20:41:20 +00:00
serversdownandClaude Opus 4.8 c8c4ec2b9f fix(sfm): /health reports the real service version, not a stale 0.1.0
terra-view's SFM Admin page (/admin/sfm) displays whatever /health returns for
`version`. That was hardcoded to "0.1.0" and never bumped, so the page showed
0.1.0 while the service was actually 0.26.0. Point both /health and the FastAPI
OpenAPI version at the release-bumped TOOL_VERSION (single source of truth), so
they can't drift again. Adds httpx-free regression tests (call health() directly).

Note: minimateplus.__version__ is separately stale at 0.1.0 — left as-is here
(nothing user-facing reads it; touching the package __init__ risks import order).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01YDXjZCr4RqT2U3QvMDhgzf
2026-08-28 20:39:51 +00:00
serversdownandClaude Opus 5 5f1ee5ba91 docs: offset investigation journal; strip NUL corruption from CLAUDE.md
Adds docs/offset_investigation.md — a dated journal of the "offset" hardware
fault, in the style of the codec status docs: findings with provenance, dead
ends kept with the reason they died, and per-unit case files.

Contents:
  - base rate 5-6 of 45 units (11-13%) over the DL2 archive, 2018-2026,
    confirming rather than overturning the earlier 2-of-21 estimate
  - the detector, with the rationale for each term and its known blind spot
    (event traces carry real motion, so only trace-dominating offsets show)
  - the bimodality result: relaxing the amplitude floor 11x adds no new units
  - Instantel's own procedure and thresholds from their FAQs 13-0-21 / 12-0-10:
    A/D-mode ">5 counts", the autozero key sequence, and the 2027-2069 X1/X8
    acceptance window that explains the ~10% field success rate of a re-zero
  - four ruled-out hypotheses, each with the evidence that killed it:
    condensation, clipping, the sensor check as a predictor (102 offset events,
    zero failures — a grossly offset unit passes its own self-check), and the
    calibration-timing correlation (confounded, one unit per time bucket)
  - open questions, chiefly whether SUB 0x0E carries the autozero numbers

Cross-referenced from CLAUDE.md and Appendix E of the protocol reference
(whose CRLF line endings are preserved).

Separately: CLAUDE.md had 793 NUL bytes appended after its last line. They
predate this work (present at least as far back as e42956a / v0.21.0) and made
grep treat the file as binary, silently skipping it. Stripped.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-08-28 20:19:30 +00:00
serversdownandClaude Opus 5 4839ddfa0e fix(scratch): dedupe the DL2 Sent/ mirror; correct the recovered-file count
The DL2 export keeps a byte-identical `Sent/` copy of its root, so walking it
counts every binary twice: 127,035 histogram paths are 63,535 distinct files,
and 13,077 waveform paths are 6,577. offset_scan.py now keeps the first
occurrence of each basename.

Corrects the previous commit's changelog claim of 8 recovered files — it is 4:
K440HJCN.3C0H and K557IF1U.8K0H (stride 252), T191HVNP.0S0H (92), T193L0XM.CI0H
(612). Still zero regressions. The per-unit breakdown reading exactly 2-2-2-2
should have given the doubling away.

The 14,338-exact verification result is unaffected: ASCII exports are not
mirrored (14,340 paths, 14,340 distinct names), and the harness enumerates
those rather than the binaries.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-08-28 20:19:30 +00:00
serversdownandClaude Opus 5 14e997b20c fix(histogram): partial final block no longer discards the correct stride
detect_multi_interval_stride() confirmed a candidate stride on a third block
header whenever the body was long enough to contain one. But a body can exceed
two strides and still hold only two real blocks: a partial final block leaves
trailing padding. BE18193 T193L0XM.CI0H — 51 intervals at 2 s, i.e. one full
30-interval block plus a 21-interval remainder in a 2787-byte body — had every
decisive check pass at stride 612 (header at 0, header at 612, block counter
256 -> 257) and was then rejected for the absent third header at 1224. It
decoded to nothing.

A missing third header now means end-of-stream rather than disqualification.
The block-counter check is untouched — that is the test that prevents the
false positives which once handed 9,082 standard-block files to the
multi-interval walker.

Found by running the full DL2 archive against its preserved Blastware ASCII
exports (14,340 paired files, 11x the previous ground-truth corpus).

Measured over 127,035 archive histogram binaries:
  recovered 8 files (strides 92, 252, 612; BE18193, BE18191, BE9557, BE9440)
  regressed 0 files
Full-corpus verification: 14,337 -> 14,338 exact of 14,338 decodable pairs
(the 2 excluded are series-4 IDF, a different codec).

Also adds scratch/verify_against_ascii.py (per-sample decoder verification
against BW exports, with a saturation carve-out — BW clamps clipped events to
the range max while the decoder reports true counts) and scratch/offset_scan.py.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01HgTe8CamXAHcAmaQ6QNcog
2026-08-28 20:19:30 +00:00
serversdownandClaude Opus 4.8 75ac610c61 fix(twins): interval-based histogram/waveform matching in find_twins (#102 sub-task 2)
A real trigger is recorded twice — as a triggered waveform (stamped at the
trigger instant) and inside the scheduled histogram whose interval contains it
(stamped at the 7am/7pm interval start). The two twins routinely differ by
HOURS, so the old ±5-minute window in find_twins silently missed them — which
broke review propagation (flagging one twin left its twin unflagged).

Twins are now matched by: same serial + identical peak_vector_sum + OPPOSITE
record type + the waveform's timestamp falling within the histogram's interval
(bounded by the next same-serial histogram). Matching keys off record timestamps
(not call-in/received times, which drift with field connectivity). window_seconds
is retained but ignored.

Rewrote test_find_twins + test_twin_propagation for the new contract (incl. the
75-min-apart UM12947 case, cross-type exclusion, containing-interval selection,
open-ended latest interval). Full suite: 264 passed; the 16 failures are
pre-existing (missing gitignored fixtures + a v0.26.0 codec case), unchanged
from baseline.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01YDXjZCr4RqT2U3QvMDhgzf
2026-08-28 05:23:30 +00:00
27 changed files with 2517 additions and 119 deletions
+121
View File
@@ -6,6 +6,127 @@ All notable changes to seismo-relay are documented here.
## [Unreleased] ## [Unreleased]
### Added
- **`events.false_trigger_reason` — optional FT cause.** A nullable `TEXT`
column recording *why* an event is a false trigger (e.g. `"offset"`), as a
subtype of the FT flag: setting a reason via the sidecar review PATCH implies
`false_trigger=1`, and the reason is cleared whenever FT ends up 0
(confirm-real, clear-FT, `set_false_trigger(false)`). `propagate_review_to_twins`
carries the reason to the histogram/waveform twin alongside the flag.
Auto-migrated (`_SCHEMA` + `_migrate` ADD COLUMN — not the Migration-1
rebuild); exposed via `/db/events`. Terra-View surfaces it as a manual
"Flag as offset" action + an `FT · offset` badge.
---
## v0.28.0 — 2026-09-02
**Offset (DC-baseline) false-trigger detector.** Productionizes the validated
pre-trigger detector: a geophone event whose baseline sits off zero and stays
flat across the record (sensor bumped / settled / drifted) is now flagged and
surfaced in Terra-View as an `offset` false-trigger reason — catching offsets the
crest/near-peak spike rule misses (an offset is low-crest and flat).
### Added
- `shape_metrics.offset_from_samples` / `offset_from_h5`: per geophone channel,
`|median(pre-trigger)| ≥ 0.025 in/s` AND `pre/mid/end spread ≤ 0.02` → offset;
the consistency test rejects transients (a real event moves one third). Reads
the `.h5` samples + the `pretrig_samples` attr, range-aware via the in/s float
samples. Constants `OFFSET_FLOOR` / `OFFSET_MAX_SPREAD` are tunable.
- `events.shape_offset` / `shape_offset_axis` / `shape_offset_pre` /
`shape_offset_spread` columns (auto-migrated: `_SCHEMA` + the `_migrate`
ADD COLUMN loop), computed at all three ingest paths and by
`backfill_event_shape.py`, exposed via `/db/events`.
Requires the shape/offset backfill on the prod store to populate existing events:
`python scripts/backfill_event_shape.py --db-path … --store-root …`.
---
## v0.27.0 — 2026-08-28
**Per-sample decoder verification at scale, plus the offset investigation.**
The series-3 codec is now verified sample-by-sample against **14,338** preserved
Blastware ASCII exports — 1,249 waveform and 13,089 histogram, spanning 45 units
and files back to 2018. That is 11x the ground truth the production store
carried, and it found one real codec bug (below).
### Fixed
- **Sub-minute histograms with a partial final block decoded to nothing**
(`histogram_codec.detect_multi_interval_stride`). The stride search confirmed
itself on a third block header whenever the body was long enough to hold one —
but a body can exceed two strides and still contain only two real blocks, because
a *partial* final block leaves trailing padding. BE18193 `T193L0XM.CI0H` (51
intervals at 2 s = one full 30-interval block plus a 21-interval remainder, in a
2787-byte body) therefore had its correct stride of 612 discarded and produced an
empty decode. A missing third header now means end-of-stream rather than
disqualification; the block-counter check, which is what actually prevents the
false positives that once mis-dispatched 9,082 files, is unchanged.
Found by decoding the full DL2 archive against its preserved Blastware ASCII
exports. Across **63,535 unique** histogram binaries the fix recovers **4 files** —
`K440HJCN.3C0H` and `K557IF1U.8K0H` (stride 252), `T191HVNP.0S0H` (92) and
`T193L0XM.CI0H` (612) — with **zero** files regressed. Verification over all
14,340 archive pairs goes 14,337 → 14,338 exact, the only remainder being two
series-4 IDF files that belong to a different codec.
(The DL2 export keeps a byte-identical `Sent/` mirror of its root, so a naive
walk double-counts every binary — 127,035 paths are 63,535 distinct files. The
ASCII exports are *not* mirrored, so the 14,340 pair count is already distinct.)
**No prod backfill is required for this.** Verified after the fact: all four
recovered files are archive-only — none exists in the production store or the
events DB — and re-running stride detection over the production store's
**10,215** histogram binaries shows **0 files whose decode changes**. The fix
matters for future ingests of sub-minute histograms with a partial final block,
not for anything already stored.
(`TOOL_VERSION` moves with the release, so whenever a backfill *is* next run for
some other reason it will regenerate the whole store rather than skipping. That
is harmless — the output is byte-identical for every currently-stored file — but
it means the run takes its full ~2 hours on the NAS.)
- **Histogram/waveform twin matching is now interval-based** (`find_twins`). A real
trigger is recorded twice — as a triggered waveform (stamped at the trigger instant)
and inside the scheduled histogram whose interval contains it (stamped at the 7am/7pm
interval start) — so the two twins can be **hours apart**. The old ±5-minute window
silently missed them, which broke review propagation (flagging one twin didn't flag its
twin). Twins are now matched by same serial + identical `peak_vector_sum` + opposite
record type + the waveform falling within the histogram's interval (bounded by the next
same-serial histogram). `window_seconds` is retained but ignored. Fixes terra-view #102
sub-task 2.
- **`/health` reported a hard-coded `0.1.0`** instead of the real service version.
`sfm/server.py` now derives its version from `minimateplus.event_file_io.TOOL_VERSION`,
making that constant the single source of truth for the service version and the
sidecar stamp alike — one place to bump at release.
- **`CLAUDE.md` had 793 NUL bytes appended** after its last line, which made `grep`
treat the file as binary and silently skip it. Present since at least v0.21.0.
Stripped.
### Added
- **`docs/offset_investigation.md`** — a dated journal of the "offset" hardware
fault: base rate, detector design, per-unit case files, ruled-out hypotheses
(each kept with the evidence that killed it), and Instantel's own autozero
procedure with its 2027–2069 acceptance window.
- **`scratch/verify_against_ascii.py`** — decodes a corpus of BW binaries and
diffs every sample against the paired `_ASCII.TXT`. Includes a saturation
carve-out: BW clamps clipped events to the range maximum and writes `OORANGE`,
while the decoder faithfully reports counts past nominal full scale.
- **`scratch/offset_scan3.py`** — offset detector. Measures the resting floor in
the *pre-trigger* window (definitionally quiet) and requires it to hold across
pre / middle / end. Result: **5 of 45 units (11%)**, stable across a 2x
threshold range. Supersedes `offset_scan.py` and `offset_scan2.py`, both kept
as the reasoning trail.
### Verified
- **19,244 healthy channel-events sit at a pre-trigger floor of exactly 0.000
(62.7%), 94.5% within ±1 quantisation unit, median +0.0000.** No systematic
zero-point bias in the decoder — an independent confirmation of the
32000-count geo full scale, arrived at from a different direction than the
ASCII sample comparisons.
--- ---
## v0.26.0 — 2026-08-27 ## v0.26.0 — 2026-08-27
+35 -15
View File
@@ -2,21 +2,28 @@
Ground-up Python replacement for **Blastware**, Instantel's Windows-only software for Ground-up Python replacement for **Blastware**, Instantel's Windows-only software for
managing MiniMate Plus seismographs. Connects over direct RS-232 or cellular modem managing MiniMate Plus seismographs. Connects over direct RS-232 or cellular modem
(Sierra Wireless RV50 / RV55). Current version: **v0.26.0**. (Sierra Wireless RV50 / RV55). Current version: **v0.27.0**.
Stack-level context — which repo owns what, and how the three project versions
pair — lives in `../terra-view/docs/tmi-stack.md`, which is also loaded as
`~/CLAUDE.md`.
--- ---
## Where things stand (updated 2026-08-27) ## Where things stand (updated 2026-08-28)
Read this first when picking the project back up. Read this first when picking the project back up.
- **Series-3 decode is correct and verified.** All 11,603 series-3 binaries in - **Series-3 decode is verified per-sample at scale (v0.27.0).** The full DL2
the prod snapshot pass every check (channel lengths, peaks vs the device's archive decodes **14,338 / 14,338** paired files exactly against their
own reported PPV, nothing above full scale, length vs declared record time). preserved Blastware ASCII exports — 1,249 waveform + 13,089 histogram, 45
Ground truth: 1,211/1,211 histograms exact per-interval and 75/75 waveform units, files back to 2018. That is 11x the ground truth the prod store
sample counts exact against preserved Blastware ASCII exports. carried, and it supersedes the old "per-sample on 11%, peak-only on 89%"
⚠ That is per-sample proof on 11% of files and peak-only consistency on the caveat. Harness: `scratch/verify_against_ascii.py` (note its saturation
other 89% — see `docs/instantel_protocol_reference.md` §7.6.1. carve-out — BW clamps clipped events, the decoder reports true counts).
Independent corroboration of the 32000-count scale: 19,244 healthy
channel-events sit at a pre-trigger floor of exactly 0.000 (62.7%), 94.5%
within ±1 quantisation unit, median +0.0000 — no zero-point bias.
- **Series-4 (Thor / Micromate) is NOT verified.** UM-series sits at ~48% - **Series-4 (Thor / Micromate) is NOT verified.** UM-series sits at ~48%
against device peaks with a ~1.7% systematic bias and a near-zero tail. against device peaks with a ~1.7% systematic bias and a near-zero tail.
Thor IDFW is pinned to `decode_waveform_legacy` deliberately. Thor IDFW is pinned to `decode_waveform_legacy` deliberately.
@@ -24,11 +31,24 @@ Read this first when picking the project back up.
(= 10.0/1.25) units discrepancy; `scripts/backfill_sidecars.py --force` also (= 10.0/1.25) units discrepancy; `scripts/backfill_sidecars.py --force` also
inserts DB rows for store files that have none (one-time per store) and the inserts DB rows for store files that have none (one-time per store) and the
dry-run does not report that count. dry-run does not report that count.
- **After any codec change, regenerate the store** — `backfill_sidecars.py - **After any codec change, regenerate the store** — `backfill_sidecars.py`
--force` then `backfill_event_shape.py`, DB backup first. Stored `.h5` files then `backfill_event_shape.py`, DB backup first. Stored `.h5` files do not
do not update themselves. update themselves. No `--force` needed as long as `TOOL_VERSION` was bumped
- **Parked:** the "offset" hardware-fault investigation (Appendix E of the (it gates regeneration). ⚠ On the office NAS this takes **~2 hours**
protocol reference) pending the multi-year BW archive. (~1.5 files/sec vs 85/sec on the dev box — gzip-4 in `sfm/event_hdf5.py`
against a Synology CPU). Budget it up front.
**v0.27.0 does NOT owe prod a backfill** — verified: the partial-final-block
fix changes 0 of the 10,215 histograms in the prod store (the 4 recovered
files are archive-only and were never ingested).
- **The "offset" hardware fault has its own journal** --
`docs/offset_investigation.md`. **5 of 45 units (11%)**, and the fault is
**persistent** — it stays until the geophone is serviced. Detect it with
`scratch/offset_scan3.py`: the resting floor in the **pre-trigger** window,
required to hold across pre/middle/end. Never score only the dominant-peak
axis and never use the mean — both produce false recoveries (see the
retraction banner in the journal). Instantel's autozero procedure and its
2027-2069 acceptance window are recorded there too. Best open lead is
`SUB 0x0E` (unimplemented), which may carry those very numbers.
When new information about the protocol is discovered, please update the instantel_protocol_reference.md with the findings in addition to this document When new information about the protocol is discovered, please update the instantel_protocol_reference.md with the findings in addition to this document
@@ -1803,4 +1823,4 @@ body) because writing a dial string may require DLE escaping for embedded contro
To parse BW TX captures: use `bridges/captures/` scripts or adapt the `find_write_frames()` pattern To parse BW TX captures: use `bridges/captures/` scripts or adapt the `find_write_frames()` pattern
in `/tmp/analyze_write_payload.py` — it correctly handles `0x10 0x03` DLE-escaped ETX bytes in `/tmp/analyze_write_payload.py` — it correctly handles `0x10 0x03` DLE-escaped ETX bytes
inside write frame data (the naive parser terminates early at the escaped `0x03`). inside write frame data (the naive parser terminates early at the escaped `0x03`).
+1 -1
View File
@@ -1,4 +1,4 @@
# seismo-relay `v0.26.0` # seismo-relay `v0.27.0`
A ground-up replacement for **Blastware** — Instantel's aging Windows-only A ground-up replacement for **Blastware** — Instantel's aging Windows-only
software for managing seismographs. Supports both the **MiniMate Plus software for managing seismographs. Supports both the **MiniMate Plus
+5
View File
@@ -3524,6 +3524,11 @@ of them was, for a while.
### E.1 The "offset" fault ### E.1 The "offset" fault
> **The full investigation now lives in `docs/offset_investigation.md`** --
> base rate, detector definition, per-unit case files, ruled-out hypotheses,
> and Instantel's own autozero procedure with its 2027-2069 acceptance
> window. This appendix is kept as the protocol-side summary.
**Symptom.** One geophone channel's baseline steps away from zero and **Symptom.** One geophone channel's baseline steps away from zero and
stays there. The trace still carries the real AC signal, but it rides stays there. The trace still carries the real AC signal, but it rides
on a DC pedestal of a few tenths of an in/s. Operators call this an on a DC pedestal of a few tenths of an in/s. Operators call this an
+686
View File
@@ -0,0 +1,686 @@
# The "offset" fault — investigation journal
> ## ⚠ CORRECTED 2026-08-28 (same day) — the v1 detector was wrong
>
> Brian pushed back on the finding that offsets "come and go": in the field,
> once a unit develops one it stays broken until the geophone is replaced.
> He was right, and the challenge exposed **two real flaws** in the v1 detector:
>
> 1. **It scored only the axis with the largest peak.** A real event on one axis
> hid a persistent pedestal on another. BE12599 on 2026-08-21 read "clean"
> solely because Long had a 1.065 in/s event — Tran was sitting at
> **+0.4732 in/s** at that moment and was never examined.
> 2. **It used the MEAN**, which a real transient perturbs. The **median** is the
> resting baseline — most samples sit at it, so a blast does not move it.
> Same event, Long channel: mean **+0.0783** vs median **-0.0050**.
>
> Both flaws manufactured false recoveries. The corrected detector
> (`scratch/offset_scan2.py`, per-channel median) shows the pedestal is
> **persistent**, exactly as the field experience says. See §2b and §3b.
>
> **Then Brian proposed a better detector still** — measure the floor during
> the *pre-trigger* window, and require it to hold across pre/middle/end.
> That is now the detector of record (§2c). Final answer: **5 of 45 units
> (11%)**, stable across a 2x threshold range.
>
> Sections below that were written against v1 are marked; v1 numbers are kept
> for the reasoning trail, not as current fact.
A running record of the **offset** hardware fault on Instantel Series III
seismographs: a geophone channel whose trace sits displaced from zero rather
than centred on it.
This is a *journal*, not a spec. Findings are dated, dead ends are kept with
the reason they died, and every number says where it came from. When something
here is superseded, strike it and say why rather than deleting it — the point
is that a future session can tell what was actually established from what was
merely believed at the time.
Companion material:
- `scratch/offset_scan.py` — the detector
- `scratch/verify_against_ascii.py` — decoder verification harness
- `docs/instantel_protocol_reference.md` — wire protocol, incl. the
unimplemented `SUB 0x0E` this investigation now wants
---
## TL;DR (current state, 2026-08-28)
- **It is real device data, not a decode bug.** Settled early and confirmed
against Blastware's own ASCII exports.
- **Base rate: 5–6 of 45 units (11–13%)** across the full DL2 archive,
2018–2026. This *confirms* the earlier 2-of-21 (9.5%) estimate from the much
smaller Terra-View DB — survivorship bias from deleted events had **not**
concealed a wave of cases.
- **The fault is bimodal, not a drift continuum.** A unit is either clean or
grossly off. Loosening the amplitude threshold 11× adds no new units.
- **The unit's own sensor check cannot see it.** 102 offset events, zero
sensor-check failures. Do not try to use it as a screen.
- **Cause is still unsettled.** Instantel's autozero fixes the minority of
cases; the rest are hardware. We cannot yet tell which is which remotely.
- **The histogram corpus (63,535 files, 9.7x the waveforms) is now scanned too** —
see §8b. It independently confirms BE18438 and BE9558 with a clean 2.5x
separation, but detects only **2 of the 5** confirmed units, cannot attribute a
channel, and resolves time to ~a month. **A negative histogram result is not
evidence of health** — DC leakage into the interval peak varies 45x between units.
- **`offset_scan3.py` has a label defect** (§8b): its spread gate discards 18.8% of
high-|pre| rows onto units currently counted as clean. Re-cut before quoting any
precision number again.
- **Best open lead:** `SUB 0x0E` (channel sensor data, 8 channels × 10 bytes,
unimplemented) may carry the very numbers Instantel says to check against
**2027–2069**. Untested.
---
## 1. What the fault looks like
A healthy geophone trace is centred on zero. An offset channel is parked away
from zero, so the channel **mean approaches its own peak**. In Blastware the
signature is "parallel lines above or below the zero line" (Instantel's own
wording).
Consequences observed in the field:
- The unit can **self-trigger on its own offset** when the displacement exceeds
the geo trigger level, producing streams of junk events with no ground
motion. Instantel has a separate FAQ for this symptom (13-0-22, *"Unit
triggers continuously without activity"*).
- Recorded PPV for that channel is meaningless while the fault persists.
---
## 2. The detector
Implemented in `scratch/offset_scan.py`. Operates on raw BW binaries only — no
DB, no sidecars.
```
for each series-3 waveform binary:
decode -> per-channel ADC counts
dominant axis = channel with the largest |peak|
flag when |mean| / peak > 0.70
and |mean| >= 0.90 x the unit's geo trigger level
episodes = per-serial runs of flagged events, split on a >12 h gap
```
Why each term:
| term | purpose |
|---|---|
| `\|mean\|/peak > 0.7` | the discriminator. A DC-parked trace has mean ≈ peak. |
| `\|mean\| >= 0.9 × trigger` | amplitude floor — suppresses quiet traces where mean and peak are both tiny and the ratio is meaningless. |
| dominant axis only | the fault is per-channel; scoring all three dilutes it. |
| 12 h episode gap | separates deployments/visits rather than counting events. |
Trigger level comes from a paired `_ASCII.TXT` when one exists, else the
per-serial median learned from that unit's ASCII files, else 0.2 in/s.
**Known limitation.** Event traces contain real ground motion, so this can only
see offsets large enough to *dominate* the trace. A mild offset on a real blast
is invisible. Instantel's A/D-mode check (§5) is the only thing that sees the
mild end. Our base rate is therefore a **gross-offset** rate.
### 2b. Detector v2 — per-channel median (CURRENT)
`scratch/offset_scan2.py`. Supersedes the above.
```
for each series-3 waveform binary:
for each geo channel independently:
pedestal = median(samples) # resting baseline, robust to blasts
flag the CHANNEL when |pedestal| >= 0.025 in/s (5 A/D counts)
a unit has a real fault when a channel is flagged on >=3 CONSECUTIVE events
```
Why median: a DC pedestal shifts every sample, so it moves the median. A real
event moves only a minority of samples, so it does not. This removes the need
for the `m/p` ratio guard entirely — that guard existed only to compensate for
using the mean.
Why per-channel: the fault is on one geophone axis. Scoring only the dominant
axis means any event with motion elsewhere hides it.
Why "3 consecutive": the 0.025 in/s floor is only ~2x a healthy channel's
resting median (observed 0.010-0.015), so isolated flags are noise. Persistence
is the discriminator — and it is what the field experience predicts.
---
## 3b. Archive results, corrected (v2)
| | v1 (dominant axis, mean) | **v2 (per-channel median)** |
|---|---|---|
| units with any flagged event | 6 of 45 | 19 of 45 |
| **units with a sustained pedestal (>=3 consecutive)** | — | **8 of 45 (18%)** |
| runs of >=3 consecutive | — | 29 |
| runs of 1-2 events (noise) | — | 69 |
Units with a sustained pedestal: **BE9558, BE10895, BE11007, BE11529, BE12599,
BE13117, BE18003, BE18438**. BE10895 and BE18003 were invisible to v1.
**The affected channel is most often Vert**, which v1 got wrong — it named
whichever axis had the largest peak. BE13117 and BE18438 are both Vert faults.
Longest / clearest runs:
| unit | ch | span | events | median in/s |
|---|---|---|---|---|
| BE13117 | Vert | 2023-05-03 → 05-04 | 194 | 0.035 → **1.915** |
| BE18438 | Vert | 2026-02-25 → 02-26 | 75 | 0.180 → 0.370 |
| BE9558 | Vert | 2020-02-11 (6 h) | 33 | 0.065 → 0.090 |
| BE12599 | Tran | 2026-08-14 → 08-23 | 8 | 0.030 → **0.565** |
| BE18003 | Vert | 2021-03-17 → 06-11 | 3 | 0.040 → 0.060 |
BE12599 began **2026-08-14**, not 08-17 as v1 reported, and was still faulting
at the last event in the archive.
### 2c. Detector v3 — PRE-TRIGGER floor + constant-floor test (CURRENT)
`scratch/offset_scan3.py`. Brian's method, and better than v2 for a reason
worth naming: **the pre-trigger window is definitionally quiet** — it is the
buffer captured before the trigger fired — whereas a whole-record median is
merely *robust* to the event. `pretrig_samples` comes from the STRT record.
```
per channel:
pre = median of the first pretrig_samples samples
mid = median of the middle third
end = median of the final third
spread = max(pre,mid,end) - min(pre,mid,end)
offset when |pre| >= floor AND spread <= 0.02 in/s
real fault when a channel is flagged on >=3 CONSECUTIVE events
```
A DC offset is a **constant floor** — present before the trigger, during, and
after. The spread test rejects transients (settling, handling, a long event
tail) that move one segment relative to the others, which is what v2's
whole-record median could not do.
**The empirical noise floor justifies the threshold.** Across 19,244
non-flagged channel-events the pre-trigger floor distributes as:
| floor | share |
|---|---|
| −1 unit (−0.005) | 18.4% |
| **0.000** | **62.7%** |
| +1 unit (+0.005) | 13.4% |
**94.5% within ±1 quantisation unit; median exactly +0.0000, mean −0.0008.**
So there is **no systematic zero-point bias in the decoder** — an independent
confirmation of the 32000-count scale. A healthy channel really does read
0.000, and "any constant floor that is not 0.000" is the right signal, with
±1 unit of slack for quantisation.
**The result is threshold-insensitive**, which is what distinguishes a real
signal from a tuned one:
| floor | units flagged | sustained units |
|---|---|---|
| 2 units (0.010) | 34 | 15 ← into the noise |
| 3 units (0.015) | 26 | 8 |
| **4 units (0.020)** | 17 | **5** |
| **5 units (0.025)** — Instantel's | 12 | **5** |
| **8 units (0.040)** | 8 | **5** |
### FINAL RESULT: 5 of 45 units (11%)
**BE9558, BE11529, BE12599, BE13117, BE18438.**
Unchanged across a 2x threshold range. BE11007 and BE10895 drop out — the
spread test identifies them as transients, not pedestals.
The 11% headline happens to match v1's, but the reasoning and the unit list
differ: v1 included BE11007 and named the wrong *channel* on most units.
---
## 3. Archive results (2026-08-28)
Source: DL2 event export, 6,577 **unique** series-3 waveforms, 45 units.
See [`dl2-archive`](#8-data-and-tooling) for the `Sent/` mirror trap.
**283 suspect events, 15 episodes, 6 of 45 units (13.3%).**
Excluding BE11007 (§4, likely not an offset at all): **5 of 45 = 11.1%**.
### Threshold sensitivity — the bimodality result
Re-scoring the same corpus at a range of amplitude floors, with two
ratio cut-offs (1 A/D count = 0.005 in/s, see §5):
| \|offset\| floor | m/p > 0.7 | m/p > 0.9 |
|---|---|---|
| 5 cts (0.025 in/s) — *Instantel's own* | 333 ev / 6 units | 279 ev / **5 units** |
| 10 cts (0.050) | 294 / 6 | 274 / 5 |
| 20 cts (0.100) | 250 / 5 | 244 / 4 |
| 40 cts (0.200) | 209 / 5 | 203 / 4 |
| 80 cts (0.400) | 152 / 4 | 148 / 2 |
| 160 cts (0.800) | 144 / 2 | 141 / 1 |
Relaxing the floor by 11× (0.27 → 0.025 in/s) adds ~14% more events and **no
new units**. There is no population of mild offsets hiding below our threshold
*in event data*. Either a unit is clean or it is grossly off.
---
## 4. Per-unit case files
Ordered by severity. `m/p` medians are on the offending channel.
### BE13117 — one violent day, never again
`145 / 454 events (32%)`, **1 episode**, 2023-05-04, 6.8 h.
Offset climbed **0.393 → 1.875 in/s within the episode**. `m/p` median
**0.996** — the trace is almost pure DC. No recurrence in the rest of its 454
events. No ASCII files in the archive, so no calibration history.
### BE18438 — recurring, months apart
`87 / 293 (30%)`, **2 episodes**: 2025-11-15 (1.2 h, n=12, 0.279 → 0.369) and
2026-02-25 (**28.8 h**, n=75, 0.183 → 0.366). `m/p` median 0.967.
Clean across all 196 events preceding its 2025-08-12 calibration.
### BE9558 — six years apart
`38 / 196 (19%)`, **4 episodes**: 2020-02-11 (6.3 h, n=33, but only
0.068 → 0.086 — very mild), then 2026-04-14, 2026-04-29, 2026-05-04
(0.28–0.45). `m/p` median 0.919. Calibrated 2026-06-26; 0/7 events flagged
after, but n=7 is far too small to call it fixed.
### BE12599 — the live case ⚠
`6 / 77 (8%)`, **6 single-event episodes, one per day at exactly 05:00**,
2026-08-17 → 2026-08-23. Offset rose 0.383 → 0.565 then fell back to 0.345.
`m/p` ≈ 0.965, geo trigger 0.3 in/s — **the offset exceeds the trigger level,
so the unit is triggering on its own fault**. Last calibrated 2025-08-12.
This is the most recent and the most useful: a currently-faulting unit is the
natural experiment for the re-zero-vs-repair question (§7).
### BE11529 — marginal
`4 / 99 (4%)`, 1 episode 2025-07-08, 0.4 h, offsets only 0.051 → 0.058 in/s.
`m/p` median 0.959, so DC-dominated, but the magnitude is near the noise of
this method. Treat as unconfirmed.
### BE11007 — probably NOT an offset
`3 / 70 (4%)`, 1 episode 2022-01-17, offsets 5.500 → 6.904 in/s — by far the
largest. But `m/p` is only **0.719–0.738** against ≥0.9 for every other unit,
and the peaks are 7.6–9.4 in/s on a 10 in/s range. That reads as a **large
real blast with asymmetric ground motion**, not a parked trace. Excluded from
the headline base rate.
---
## 5. Instantel's own procedure and thresholds
From two Instantel technical-support FAQs supplied 2026-08-28
(answers **13-0-21** *"How to determine offsets"* and **12-0-10** *"Removing
offsets on an Instantel Series III monitor"*; created 2008/2007, last updated
2009-03-06).
### Identifying (13-0-21)
1. Create or use an event with the **manual minimum trigger** set for the
connected geophone and microphone — i.e. an event that recorded no real data.
2. Save it and open in Blastware.
3. An offset shows as **parallel lines above or below the zero line**.
4. Put the unit in **A/D mode** — on Series III, press and hold `OPTION`, then
press `START MONITOR`.
5. **Display counts higher than 5**, with no vibration or overpressure present,
indicate an offset.
### Removing — the autozero (12-0-10)
1. Be in a **quiet area with low vibration**.
2. Power on the Blastmate III / Minimate Plus.
3. Connect the geophone and microphone — **LINEAR mic only**.
⚠ *Do not connect an "A" weight microphone, regardless of what the monitor
displays.*
4. Press `Test`.
5. Wait for the **Sensor Check** results to appear.
6. Press `OPTION` and `START MONITOR` **simultaneously**.
7. `Performing Autozero` appears; press `Enter`.
8. Confirm the sensors are properly connected; press `Enter`.
9. Wait for the autozero to complete.
10. Press `Enter` twice → Main Menu, *Ready To Monitor*, offset corrected.
### The go/no-go number — 2027 to 2069
> When you perform an Autozero on any Series III unit, the lists of numbers in
> the **X1 and X8 gains should all be between 2027 and 2069**. If not, repeat
> the Autozero. **If the numbers are extremely out of the specified range, then
> the unit should be sent in for repair.**
>
> If this process does not remove the offset problem, return the unit **and
> sensors** to Instantel for repair.
This is the documented explanation for the field experience (Brian's dad,
2026-08-28) that **a re-zero works maybe 10% of the time** — the autozero only
recovers units whose zero reference is still near-correct.
### Scale derivation (inference, well-supported — not proven)
2048 is 12-bit midscale. Our codec's geo full scale is 32000 internal counts =
10 in/s, with 1 decoder unit = 16 counts = exactly 0.005 in/s
(`geo-full-scale-is-32000-counts`). ±2000 A/D counts about 2048 therefore maps
to ±10 in/s at **0.005 in/s per A/D count**. That makes:
- Instantel's ">5 counts" threshold ≈ **0.025 in/s**
- the 2027–2069 window = **±21 counts = ±0.105 in/s** of tolerated zero error
Consistent and mutually corroborating, but we have not confirmed the A/D-count
scale directly from a device reading.
---
## 6. Ruled out — keep these dead
### Condensation / humidity — DEAD (2026-08-25)
Proposed, then killed by its own controls: BE18438 stayed flat across a 10-hour
overnight gap, and only 2 of 21 units showed the fault while 19 sat in the same
weather. The apparent "diurnal cycle" was an artifact of binning by hour-of-day
across two days. See `waveform-dc-offset-is-real-device-data`.
### Clipping as a false-positive source — RULED OUT (2026-08-28)
A rail-hitting trace would fake an offset (mean → peak). It isn't happening:
median suspect peak is only **10% of full scale**, p90 is 18.6%. Only BE11007's
3 events exceed 50% FS, and none reach 98%.
### The sensor check as a predictor — DOES NOT WORK (2026-08-28)
Tested on 102 offset events across 4 units:
| unit | state | n | failed | median ratio | median freq |
|---|---|---|---|---|---|
| BE11529 | offset | 4 | **0** | 3.90 | 7.6 |
| BE11529 | clean | 14 | 0 | 3.80 | 7.5 |
| BE12599 | offset | 6 | **0** | 4.00 | 7.4 |
| BE12599 | clean | 13 | 0 | 4.00 | 7.6 |
| BE18438 | offset | 87 | **0** | 3.70 | 7.6 |
| BE18438 | clean | 25 | 0 | 3.80 | 7.5 |
| BE9558 | offset | 5 | **0** | 3.90 | 7.8 |
| BE9558 | clean | 44 | 0 | 3.80 | 7.5 |
Zero failures on either side and indistinguishable ratios/frequencies. The
swing test measures geophone frequency response and damping — it never examines
DC zero. **A grossly offset unit passes its own self-check.** This is why the
fault goes unnoticed until somebody looks at waveforms.
### "Offsets are transient / come and go on their own" — RETRACTED 2026-08-28
v1 reported episodes lasting hours that ended spontaneously. **This was an
artifact of the v1 detector** (see the banner at the top). With the per-channel
median, the pedestal persists. Every clear case reads clean again only after a
multi-day-to-multi-month gap consistent with service: BE13117 6 days, BE18438
24 days, BE9558 63 days **with a confirmed Instantel calibration inside the
gap**. BE12599 never reads clean — it is still faulting at the end of the
archive. This matches the operational experience: once a unit develops an
offset it stays broken until the geophone is replaced.
### "Offsets develop N months after calibration" — CONFOUNDED, NOT A FINDING
Tempting, and it looked strong:
| unit | suspect before latest cal | after |
|---|---|---|
| BE18438 | 0 / 196 | 87 / 97 |
| BE12599 | 0 / 62 | 6 / 15 |
| BE11529 | 0 / 82 | 4 / 17 |
| BE9558 | 38 / 189 | 0 / 7 |
But bucketing suspects by months-since-calibration gives **one unit per bucket**:
`0–3mo={BE11529}`, `3–6 & 6–9mo={BE18438}`, `9–12mo={BE9558}`,
`12–15mo={BE12599}`. The apparent "51% failure rate at 6–9 months" is entirely
BE18438's single February 2026 episode. Five units with roughly one episode
each cannot support a population trend. **Do not re-derive this.**
Also note: all affected units are calibrated on a **~12–13 month cadence**, so
"sent to Instantel" is the routine annual schedule, not evidence of a
fault-driven return.
---
## 7. Open questions
### Q1 — Is it a latched bad zero or analog degradation?
The question that decides everything. A latched zero is correctable (possibly
over the wire); degradation means a repair. Instantel's 2027–2069 rule implies
*both* populations exist, with the split roughly 10/90 in the field.
**BE12599 is the natural experiment** — faulting as of 2026-08-23. Read its
values, run the autozero, read them again.
### Q2 — Can we read the autozero numbers over the wire? (best lead)
Instantel says to check *"the lists of numbers in the **X1 and X8 gains**"* —
4 sensors × 2 gains = **8 channels**. The protocol reference already documents
an unimplemented command with exactly that shape:
```
SUB 0x0E -> RSP 0xF1 "channel sensor data"
2-step read; channel selector in params[6:8] = 0x0000..0x0007
data length 0x0A (10 bytes) per channel
```
Blastware's *Unit Channel Test* sequence:
`POLL×N → 0x15 → 0x01 → 0x08 → 0x01 → 0x0E×8 → 0x98×2 → 0x0E×8`
— note the **second `0x0E` pass carries live ADC readings**.
**Hypothesis (untested):** `0x0E` returns the numbers Instantel wants compared
against 2027–2069. If true, SFM could diagnose an offset remotely *and* predict
whether a re-zero will succeed — converting a 10%/90% shipping gamble into a
decision made before packing a box.
**How to test.** `bridges/ach_mitm.py` is a generic TCP proxy:
```bash
python bridges/ach_mitm.py --bw-host <MODEM_IP> --bw-port 9034 --listen-port 9999
```
Point Blastware at the proxy and run **Unit Channel Test**.
⚠ In this topology the output filenames are reversed — the tool labels the
*connecting* side "unit", so `raw_s3_*.bin` holds Blastware's bytes and
`raw_bw_*.bin` the unit's.
Capture priority: (1) BE12599 while faulting, (2) a known-good unit as control,
(3) before/after an autozero on the same unit. Eight 10-byte payloads with an
expected value near 2048 is a very constrained puzzle.
### Q3 — What is the mild-offset rate?
Unmeasurable from event files (§2). Only the A/D-mode check sees it. Would
need a fleet sweep in A/D mode, or Q2 to succeed.
### Q4 — Does an offset recur on the same unit after service?
BE9558 shows episodes in 2020 and 2026; BE18438 twice in four months. Suggestive
of recurrence, but service records aren't in the data — only calibration dates.
---
## 8. Data and tooling
| what | where |
|---|---|
| detector | `scratch/offset_scan.py` |
| current results | `/home/serversdown/dl2-archive/offset_archive.csv` |
| earlier candidate list (Terra-View DB, 274 events) | `scratch/offset_candidates.csv` |
| archive working copy | `/home/serversdown/dl2-archive/files/` |
| archive source | NAS `DeathStar` 10.0.0.2, `/volume1/Uploads/TMI/DL2-Event-backup-8-25-26/Event/autocall home/` |
⚠ **The DL2 export keeps a byte-identical `Sent/` mirror of its root.** 13,077
waveform paths are 6,577 distinct files. Always dedupe by basename — this
doubled two reported figures before it was caught.
---
## 8b. The histogram corpus — the other 90% of the archive (2026-09-04)
Every result above §8 comes from **waveform** files. `offset_scan3.py` filters on
`\.[A-Za-z0-9]{2}0[Ww]$`, so the corpus it scanned is 6,577 unique binaries. The
archive also holds **63,535 unique histograms** — 9.7x more files — which the
pre-trigger method cannot touch, because a histogram carries no samples: only a
per-interval, per-channel peak and half-period.
`scratch/offset_hist_scan.py` scans them. **63,505 of 63,535 decoded (99.95%),
43 units, 77.9M intervals.** Two of the 45 units have no histograms at all.
Output: `/home/serversdown/dl2-archive/offset_hist.csv` (190,515 channel-rows).
### The premise, and how far it actually holds
A histogram file is hours of continuous monitoring, so most of its intervals are
definitionally quiet, and a channel parked off zero cannot report a peak below
its own displacement. The signal is real — two within-unit contrasts, siblings
unmoved in both:
| unit | channel | in-episode floor | outside | waveform \|pre\| same window |
|---|---|---|---|---|
| BE18438 | Vert | 0.0350 | 0.0050 | +0.18 .. +0.37 |
| BE12599 | Tran | 0.0250 | 0.0050 | +0.03 .. +0.49 |
But the **leakage from a waveform pedestal into the histogram floor is bimodal,
not merely partial**: measured ratio ~0.9 on BE18438 Vert, ~0.7 on BE9558,
**~0.02 on BE12599** — two orders of magnitude on one instrument. The device
evidently measures each interval peak against a running baseline, and how much
DC survives that varies per unit. **Consequence: a negative histogram result
carries almost no information.** Do not read "clean in the histograms" as clean.
### The detector that survived
dmin(file, ch) = min[ch] - min over the other two geo channels, SAME file
gates (both hard): n_intervals >= 60 AND mic_p5 <= 5 raw counts
day statistic: median of dmin over that day's qualifying files
flag day at dmin >= 0.020 in/s (4 A/D counts)
episode at >= 3 CONSECUTIVE observed days
**Result: BE18438|Vert, BE9558|Tran, BE9558|Long.** Threshold-insensitive —
the journal's own test for a real signal against a tuned one — and this is the
first operating point in the investigation that passes it cleanly. The identical
answer holds across: statistic `min` or `p5`; length gate 10/30/60/120/300; mic
gate 3/5/8/10; threshold 0.015–0.035 (a 2.3x span); persistence K = 2,3,4,5,7.
Separation, ranked by highest floor sustained over 3 consecutive gated days
across all 135 unit-channels:
| unit-channel | best3 |
|---|---|
| BE18438 Vert | 0.1650 |
| BE9558 Long | 0.0350 |
| BE9558 Tran | 0.0250 |
| *(2.5x gap)* | |
| BE7145 Tran | 0.0100 |
| entire rest of fleet | <= 0.0050 (one quantisation count) |
Day-level false alarm: **37 of 99,432 gated unit-channel-days = 0.037%.**
### What it does NOT do — read this before trusting it
- **It finds 2 of the 5 confirmed units, not 5.** The site-quiet gate is what
makes it work and it is also what costs BE11529 and BE12599. BE11529's
four-day single-axis ramp (Tran 0.025 -> 0.055, both siblings pinned at 0.005)
is the most offset-shaped thing in the corpus outside the two detections, and
the gate discards it.
- **The positive class is two units.** Every threshold here is fitted to
BE18438 and BE9558, which contribute 22 of the 37 flagged days in the entire
corpus. No cross-validation is possible at n=2.
- **Per-channel attribution is NOT established.** Rotating the three geo channel
labels within each file — preserving every value, file and day, destroying
only channel identity — reproduces the episode *count* with p = 0.769 and the
label agreement at p = 0.038–0.077. Report a **unit and a window**; do not
name a geophone axis on the strength of this detector alone.
- **Timing resolution is ~1 month, not ~1 day.** A 30-day label shift still
scores 2 of 9 episode hits; the signal dies only past ~60 days. The day-level
series look far crisper than they are.
- **Ground truth here is a sibling detector, not a service record.** Agreement
between the two corpora is corroboration of a shared method. Nothing in this
section has been checked against an actual repair, calibration or RMA.
### Dead ends — keep these dead
- **Absolute floor (min / p1 / p5 / p10 / p25, thresholded alone) — RETIRED.**
Not fleet-comparable and mostly not about the channel. Scoring each cell using
*only the other two channels* — a statistic containing zero information about
the suspect channel — reaches AUC 0.746 against the same labels, versus 0.872
for the absolute floor itself. **66% of its apparent discrimination is "that
day was noisy at that site."** Interval size alone moves its p99 7x (0.0350 at
1 min vs 0.0050 at 2 s). And of all files with any channel above 0.025, 56.5%
have **all three** channels above it — common-mode, i.e. the wrong physics.
- **Zero-fraction — STRUCTURALLY IMPOSSIBLE, not merely weak.** The device never
reports a zero histogram interval peak. The value is a max over hundreds of
samples of a channel that always carries at least 1 count of noise, so it is
clamped at 1 A/D count (0.005 in/s). There is no zero to count.
- **Interval size, sample rate, geo range, firmware — refuted as confounds for
the differential.** All four are *file-level scalars*: they move all three geo
channels together, so they cannot produce a single-channel lift and the
within-file differential is immune to them by construction. Geo range is
identical across the three geo channels in **63,535 of 63,535** binaries.
(Interval size remains fatal to the *absolute*-floor version, above.)
### Two findings that are independent of the histogram detector
**1. `offset_scan3.py`'s `spread <= 0.02` gate is discarding real signal.**
It rejects **113 of the 600 channel-rows with |pre| >= 0.025 (18.8%)**, and the
rejections are not random — 92 of them fall across 41 unit-channels currently
labelled NEGATIVE. Four would become sustained positives under an
amplitude-only >=3-consecutive rule: **BE12599|Long (run of 8), BE18003|Vert
(4), BE10895|Vert (3), BE12844|Tran (3).** Until this is re-cut, the fleet label
is **three-state — POSITIVE / NEGATIVE / SPREAD-REJECTED(unknown)** — and the
third state should be excluded from both TP and FP counts rather than silently
scored as healthy. Every precision figure computed against the two-state label,
in this section and in §3, is affected.
**2. The waveform corpus sees ~7% of the days a unit was deployed.** 2,627
(unit, day) observations against the histogram corpus's 35,105 — 13.4x — with a
per-unit median ratio of 0.070. BE12599, a confirmed unit, is waveform-observed
on 39 of its 1,666 histogram-observed days (**2.3%**). Any statement of the form
"the fault was absent before date X" that rests on waveform coverage alone is
much weaker than its event count suggests.
### BE10895 — reclassified (see also §4)
Previously dismissed as a transient. The histogram record shows its **Vert**
quiet-minute floor at 0.005 on 62/62 qualifying files from 2023-07-07, then
0.010–0.015 on 48/58 files from 2023-08-03 to 08-27, while Tran moves on 2/58
and Long on 9/58 and the site mic floor never leaves 1–3 counts. Independently,
**42 of its 85 waveform events (49.4%) are single-axis-dominant** — one geo peak
>= 10x both siblings and >= 0.05 in/s — the **highest rate in the 45-unit
fleet** (BE13117 36.1%, BE18438 29.4%), and **100% of it on Vert**. Vert
excursions of 0.1–1.5 in/s with Tran/Long at 0.005–0.035 are not ground motion.
This is a genuine Vert-channel hardware fault, but **not the classic pedestal** —
the differential is only one A/D count. Caveat: its entire histogram record is a
single 52-day deployment ending 2023-08-27, so nothing says whether it
persisted, was serviced, or resolved.
The other six marginal units — BE11007, BE17354, BE18004, BE18104, BE9557,
BE18003 — are **clean**. All seven cap at +0.005 to +0.007 (one A/D count)
lifetime under the quiet-site gate, against +0.175 for BE18438 Vert and +0.062
for BE9558 Long. Three individual waveform flags fall in windows with **zero**
histogram coverage and are NO-DATA, not clean: BE18004|Tran 2024-10-16,
BE9557|Tran 2021-06-28, BE9557|Vert 2025-06-12.
### Still open in this section
- **The 11 thin-coverage units were not screened** (BE10202, BE11462, BE13779,
BE15760, BE15957, BE16754, BE16758, BE8081, BE8626, BE9229, BE9887 — each
under 20 waveform events, several with hundreds of histograms). This is the
population most likely to hold a previously unknown offset, and it is the one
slice of the plan that did not run. BE11462 was incidentally scored clean by
the full-archive pass; BE10202 has no histogram files at all.
- **No completeness audit was run** over the above.
- Re-cutting the ground truth three-state (finding 1) and re-scoring everything
against it.
---
## 9. Chronology
| date | event |
|---|---|
| 2026-08-25 | Reported as a *waveform decode bug* — traces with a DC offset. Investigation shows the offset is **real device data**; the decoder is correct. |
| 2026-08-25 | Brian relays his dad's description: a known hardware fault called an "offset"; usually sent to Instantel. |
| 2026-08-25 | First detection pass over the Terra-View DB: **2 of 21 units**, 274 events, 11 months. Flagged as vulnerable to survivorship bias — flooded events were routinely deleted. |
| 2026-08-25 | Condensation hypothesis proposed, then **killed by its own controls**. |
| 2026-08-25 | Parked pending the multi-year archive. |
| 2026-08-28 | DL2 archive pulled (33 GB, 546k files; 6.6 GB working set). |
| 2026-08-28 | Archive scan: **6 of 45 units**, 283 events, 15 episodes. Prior base rate **confirmed**, not overturned. |
| 2026-08-28 | Clipping ruled out; `m/p` established as the discriminator; BE11007 reclassified as probably a real blast. |
| 2026-08-28 | Calibration-timing correlation attempted and **rejected as confounded**. |
| 2026-08-28 | Instantel FAQs supplied: autozero procedure, the **2027–2069** window, the **>5 counts** threshold. Explains the ~10% re-zero success rate. |
| 2026-08-28 | Bimodality established; sensor check proven **blind** to offsets; `SUB 0x0E` identified as the best open lead. |
| 2026-08-28 | **v1 detector retracted.** Brian challenged the "come and go" finding against field experience. Two flaws found: dominant-axis-only scoring and mean-instead-of-median. Corrected detector shows persistent pedestals on **8 of 45 units**, and the gaps are service windows. |
| 2026-08-28 | **Detector v3 (Brian's method):** pre-trigger floor + pre/mid/end consistency. Healthy channels proven to sit at 0.000 +/-1 unit (94.5%), confirming no decoder zero-point bias. Final: **5 of 45 units (11%)**, threshold-insensitive. |
| 2026-09-04 | **Histogram corpus scanned** — 63,505 of 63,535 files, 43 units, 77.9M intervals (9.7x the waveform corpus). `scratch/offset_hist_scan.py`. |
| 2026-09-04 | Absolute-floor statistic **retired**: 66% of its discrimination is a day/site confound (other-channels-only AUC 0.746 vs 0.872). Zero-fraction shown **structurally impossible** — the device clamps every interval peak at >= 1 count. |
| 2026-09-04 | Site-quiet-gated cross-channel differential established: **BE18438 Vert, BE9558 Tran+Long**, threshold-insensitive over a 2.3x span. Finds only **2 of the 5** confirmed units — leakage into the histogram floor is bimodal (0.9 to 0.02), so a negative result carries almost no information. Per-channel attribution **not** established (channel-scramble p = 0.769). |
| 2026-09-04 | **BE10895 reclassified** from transient to a genuine Vert fault of a different subtype — 49.4% single-axis-dominant events, the highest in the fleet, 100% on Vert. The other six marginal units are clean. |
| 2026-09-04 | **Defect found in `offset_scan3.py`**: its `spread <= 0.02` gate discards 18.8% of rows with \|pre\| >= 0.025, concentrated on 41 negative unit-channels; 4 would be sustained positives without it. The fleet label is three-state, not two. |
+9 -1
View File
@@ -30,6 +30,7 @@ from __future__ import annotations
import datetime import datetime
import logging import logging
import re
import struct import struct
from typing import Optional from typing import Optional
@@ -2532,10 +2533,17 @@ def _decode_0a_partial_header(raw_data: bytes, index: int, key4: bytes) -> Optio
ts2 = try_ts(raw_data[ts1_end + 1:ts1_end + 1 + ts_size]) ts2 = try_ts(raw_data[ts1_end + 1:ts1_end + 1 + ts_size])
# Extract serial and geo threshold from "BE11529\0" and "Geo: X.XXX in/s\0". # Extract serial and geo threshold from "BE11529\0" and "Geo: X.XXX in/s\0".
#
# Match any two-letter family prefix, not a literal "BE" — a BlastMate
# reports "BA10895", and the old `find(b"BE")` returned -1 on one. That
# skipped this whole block, so the geo threshold went missing along with
# the serial. Requiring the NUL terminator in the pattern also makes the
# match stricter than the bare two-byte search it replaces.
serial: Optional[str] = None serial: Optional[str] = None
geo_ips: Optional[float] = None geo_ips: Optional[float] = None
serial_pos = raw_data.find(b"BE") serial_match = re.search(rb"[A-Z]{2}\d{3,6}(?=\x00)", raw_data)
serial_pos = serial_match.start() if serial_match else -1
if serial_pos >= 0: if serial_pos >= 0:
# Read null-terminated serial starting at serial_pos. # Read null-terminated serial starting at serial_pos.
null_pos = raw_data.find(b"\x00", serial_pos) null_pos = raw_data.find(b"\x00", serial_pos)
+1 -1
View File
@@ -50,7 +50,7 @@ SIDECAR_KIND = "sfm.event"
# bumped without a `pip install` re-run — leading to confusing stale # bumped without a `pip install` re-run — leading to confusing stale
# version stamps in sidecars. Bump this constant and CHANGELOG.md # version stamps in sidecars. Bump this constant and CHANGELOG.md
# together at release time. # together at release time.
TOOL_VERSION = "0.26.0" TOOL_VERSION = "0.28.0"
try: try:
# Best-effort: prefer the installed metadata when it's NEWER than the # Best-effort: prefer the installed metadata when it's NEWER than the
+12 -4
View File
@@ -413,10 +413,18 @@ def detect_multi_interval_stride(body: bytes) -> Optional[int]:
if (_ctr(stride) - _ctr(0)) & 0xFFFF != 1: if (_ctr(stride) - _ctr(0)) & 0xFFFF != 1:
continue continue
# confirm on a third block when the body is long enough # Confirm on a third block WHEN ONE IS ACTUALLY PRESENT. A body can
if 2 * stride + _MULTI_HEADER_LEN <= len(body): # be longer than two strides and still hold only two real blocks: a
if not _is_multi_header(body, 2 * stride): # final *partial* block leaves trailing padding. E.g. 51 intervals at
continue # 2 s = one full 30-interval block + a 21-interval remainder, in a
# 2787-byte body — long enough to demand a third header at 1224 that
# does not exist. Requiring it unconditionally threw away the correct
# stride and the file decoded to nothing (BE18193 T193L0XM.CI0H).
# The block-counter check above is the decisive anti-false-positive
# test; this one is corroboration, so a missing third header means
# end-of-stream, not disqualification.
if (2 * stride + _MULTI_HEADER_LEN <= len(body)
and _is_multi_header(body, 2 * stride)):
if (_ctr(2 * stride) - _ctr(stride)) & 0xFFFF != 1: if (_ctr(2 * stride) - _ctr(stride)) & 0xFFFF != 1:
continue continue
return stride return stride
+1 -1
View File
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
[project] [project]
name = "seismo-relay" name = "seismo-relay"
version = "0.26.0" version = "0.27.0"
description = "Python client and REST server for MiniMate Plus seismographs" description = "Python client and REST server for MiniMate Plus seismographs"
requires-python = ">=3.10" requires-python = ">=3.10"
dependencies = [ dependencies = [
+234
View File
@@ -0,0 +1,234 @@
#!/usr/bin/env python3
"""Offset detector — HISTOGRAM corpus (the other 90% of the archive).
`offset_scan3.py` measures the pre-trigger floor in *waveform* samples. That
covers 6,577 of the archive's 70,112 unique series-3 files; the remaining
63,535 are **histograms**, which carry no samples — only a per-interval,
per-channel peak + half-period. So the pre-trigger method cannot run on them.
The histogram analogue of "the resting floor" is the **low percentile of the
per-interval peaks**. A histogram file is typically hours of continuous
monitoring, so the great majority of its intervals are definitionally quiet;
the bottom of that distribution is what the channel reads when nothing is
happening. A healthy channel bottoms out at 0.000-0.005 in/s. A channel
parked off zero cannot report a peak below its own displacement, so its floor
is pinned up.
⚠ The DC leakage into the histogram peak is PARTIAL. Measured within-unit
against episodes already established from the waveform scan:
BE18438 Vert in-episode 0.0350 vs 0.0050 outside (waveform pre = +0.18..+0.37)
BE12599 Tran in-episode 0.0250 vs 0.0050 outside (waveform pre = +0.03..+0.49)
so the device's per-interval peak is evidently measured against a running /
AC-coupled baseline that removes most, but not all, of the DC. The residual
is real and channel-specific, but the margin is ~5 quantisation counts rather
than the ~70 the waveform detector enjoys. Do not carry the waveform
detector's 0.025 in/s floor across unexamined — calibrate on the CSV.
Because the absolute floor also moves with site noise (traffic, wind, a
generator), the statistic that matters most is the **cross-channel
differential**: a channel's floor minus the quietest of the other two geo
channels in the same file. Site noise lifts all three together and cancels;
a DC offset lifts one.
This script does not decide anything. It emits every candidate statistic per
(file, channel) so thresholds can be calibrated against the waveform-derived
ground truth in `offset_v3.csv` rather than guessed.
Usage:
python scratch/offset_hist_scan.py --dir /home/serversdown/dl2-archive/files \
--out /home/serversdown/dl2-archive/offset_hist.csv --jobs 4
"""
from __future__ import annotations
import argparse
import csv
import datetime
import logging
import re
import statistics
import sys
from concurrent.futures import ProcessPoolExecutor, as_completed
from pathlib import Path
sys.path.insert(0, str(Path(__file__).resolve().parent.parent))
from minimateplus.event_file_io import read_blastware_file # noqa: E402
GEO = ("Tran", "Vert", "Long")
K = 10.0 / 32000.0 # ADC count -> in/s (see CLAUDE.md: full scale 32000)
_HIST = re.compile(r"\.[A-Za-z0-9]{2}0[Hh]$")
_STEM = re.compile(r"^([B-Z])(\d{3})")
_B36 = "0123456789ABCDEFGHIJKLMNOPQRSTUVWXYZ"
_SERIAL_RE = re.compile(rb"\b([A-Z]{2}\d{3,6})\b")
def serial_of(name: str, path=None) -> str:
"""Real serial for a BW file.
The filename encodes only the NUMBER: `<letter><3 digits>` where
letter = chr(ord('B') + serial // 1000). The two-letter family prefix
("BE", "BA", ...) is **not** in the filename, so it must be read out of
the file body. Four units in the DL2 archive are BA, not BE — assuming
"BE" mislabels BA9229, BA10060, BA10895 and BA15957.
"""
m = _STEM.match(name)
if not m:
return "?"
num = (ord(m.group(1)) - ord("B")) * 1000 + int(m.group(2))
if path is not None:
try:
for s in _SERIAL_RE.findall(Path(path).read_bytes()):
s = s.decode()
if s[2:].lstrip("0") == str(num):
return s
except Exception:
pass
return f"BE{num}" # last-resort fallback; prefix unverified
def stem_time(name: str):
"""Decode the filename's base-36 timestamp. Epoch 1985-01-01, 1296 s/tick.
Preferred over the file's own footer timestamp only because it costs
nothing; the caller falls back to the decoded event when this fails.
"""
try:
base, ext = name.rsplit(".", 1)
n = 0
for c in base[4:8].upper():
n = n * 36 + _B36.index(c)
ab = _B36.index(ext[0].upper()) * 36 + _B36.index(ext[1].upper())
return datetime.datetime(1985, 1, 1) + datetime.timedelta(seconds=n * 1296 + ab)
except Exception:
return None
def _pct(sorted_vals, q):
"""Nearest-rank percentile on an already-sorted list."""
if not sorted_vals:
return None
i = min(len(sorted_vals) - 1, max(0, int(len(sorted_vals) * q / 100.0)))
return sorted_vals[i]
def scan(path_str: str):
logging.disable(logging.WARNING) # per-worker: the codec warns on undecodables
p = Path(path_str)
try:
ev = read_blastware_file(p)
except Exception:
return None
s = ev.raw_samples or {}
if not any(s.get(c) for c in GEO):
return None
ts = stem_time(p.name) or ev.timestamp
stamp = ""
if ts is not None:
stamp = (f"{ts.year:04d}-{ts.month:02d}-{ts.day:02d}T"
f"{ts.hour:02d}:{ts.minute:02d}:{ts.second:02d}")
# Per-channel floor candidates, in in/s.
stats = {}
for ch in GEO:
v = sorted(s.get(ch) or [])
if not v:
continue
stats[ch] = {
"n": len(v),
"min": v[0] * K,
"p1": _pct(v, 1) * K,
"p5": _pct(v, 5) * K,
"p10": _pct(v, 10) * K,
"p25": _pct(v, 25) * K,
"med": statistics.median(v) * K,
"peak": v[-1] * K,
"zeros": sum(1 for x in v if x == 0) / len(v),
}
if len(stats) < 2: # need at least one sibling channel for the differential
return None
# Mic floor as a site-noise proxy (raw counts; the dB conversion is not
# needed — only its relative movement matters here).
mic = sorted(s.get("MicL") or [])
mic_p5 = _pct(mic, 5) if mic else ""
rows = []
for ch, st in stats.items():
others = [stats[o]["p5"] for o in stats if o != ch]
rows.append({
"serial": serial_of(p.name, p),
"timestamp": stamp,
"filename": p.name,
"channel": ch,
"n_intervals": st["n"],
"min": round(st["min"], 4),
"p1": round(st["p1"], 4),
"p5": round(st["p5"], 4),
"p10": round(st["p10"], 4),
"p25": round(st["p25"], 4),
"median": round(st["med"], 4),
"peak": round(st["peak"], 4),
"frac_zero": round(st["zeros"], 4),
# the site-noise-cancelling statistic: this channel's floor above
# the quietest sibling geo channel in the same file
"diff_p5": round(st["p5"] - min(others), 4),
"mic_p5": mic_p5,
})
return rows
COLS = ["serial", "timestamp", "filename", "channel", "n_intervals",
"min", "p1", "p5", "p10", "p25", "median", "peak", "frac_zero",
"diff_p5", "mic_p5"]
def main():
ap = argparse.ArgumentParser()
ap.add_argument("--dir", required=True)
ap.add_argument("--out", required=True)
ap.add_argument("--jobs", type=int, default=4)
ap.add_argument("--limit", type=int, default=0, help="stop after N files (smoke test)")
a = ap.parse_args()
# Dedupe by basename — the DL2 export keeps a byte-identical `Sent/`
# mirror of its root, which doubled two figures before it was caught.
seen, files = set(), []
for q in sorted(Path(a.dir).rglob("*")):
if q.is_file() and _HIST.search(q.name) and q.name not in seen:
seen.add(q.name)
files.append(str(q))
if a.limit:
files = files[:a.limit]
print(f"unique histogram binaries: {len(files)}", flush=True)
rows, undecodable = [], 0
with ProcessPoolExecutor(max_workers=a.jobs) as ex:
futs = [ex.submit(scan, f) for f in files]
for i, fut in enumerate(as_completed(futs), 1):
r = fut.result()
if r:
rows.extend(r)
else:
undecodable += 1
if i % 5000 == 0:
print(f" {i}/{len(files)}", flush=True)
with open(a.out, "w", newline="") as fh:
w = csv.DictWriter(fh, fieldnames=COLS)
w.writeheader()
w.writerows(rows)
files_ok = len({r["filename"] for r in rows})
units = len({r["serial"] for r in rows})
ivals = sum(r["n_intervals"] for r in rows) // 3
print(f"\ndecoded {files_ok}/{len(files)} files "
f"({undecodable} undecodable), {units} units, ~{ivals/1e6:.1f}M intervals")
print(f"wrote {a.out} ({len(rows)} channel-rows)")
if __name__ == "__main__":
main()
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#!/usr/bin/env python3
"""Scan series-3 waveform binaries for the 'offset' hardware fault.
A healthy geophone trace is centred on zero. An offset unit sits displaced,
so the channel mean approaches its own peak. Detector (unchanged from the
2026-08-25 run, see memory note `offset-archive-analysis-backlog`):
dominant-axis |mean| / peak > 0.7
AND |mean| >= 0.9 * the unit's geo trigger level
Trigger level is read from a paired _ASCII.TXT where one exists, otherwise
from a per-serial median learned across that unit's ASCII files, otherwise
--default-trigger.
Serial is decoded from the BW filename: prefix letter encodes thousands
(chr(ord('B') + n)), next 3 digits the remainder -- T193 -> BE18193.
Usage:
python scratch/offset_scan.py --dir <path> [--jobs N] --out offsets.csv
"""
from __future__ import annotations
import argparse, csv, json, re, sys
from collections import defaultdict
from concurrent.futures import ProcessPoolExecutor, as_completed
from pathlib import Path
sys.path.insert(0, str(Path(__file__).resolve().parent.parent))
from minimateplus.event_file_io import read_blastware_file
from minimateplus.bw_ascii_report import parse_report
GEO = ("Tran", "Vert", "Long")
_GEO_FS_COUNTS = 32000.0
_WAVE_RE = re.compile(r"\.[A-Za-z0-9]{2}0[Ww]$")
_STEM_RE = re.compile(r"^([B-Z])(\d{3})")
MEAN_OVER_PEAK_MIN = 0.7
TRIGGER_FRACTION = 0.9
def serial_from_name(name: str):
m = _STEM_RE.match(name)
if not m:
return None
letter, digits = m.group(1), m.group(2)
return f"BE{(ord(letter) - ord('B')) * 1000 + int(digits)}"
def counts_to_ips(c, gr):
return c * (gr or 10.0) / _GEO_FS_COUNTS
def scan_one(path_str: str, default_trigger: float) -> dict | None:
p = Path(path_str)
try:
gr, trig = 10.0, None
ap = p.with_name(p.name.replace(".", "_", 1) + "_ASCII.TXT") \
if False else p.parent / (p.stem + "_" + p.suffix.lstrip(".") + "_ASCII.TXT")
if ap.exists():
rep = parse_report(ap.read_text(errors="replace"))
gr = rep.geo_range_ips or 10.0
trig = rep.geo_trigger_level_ips
ev = read_blastware_file(p)
s = ev.raw_samples or {}
if not all(s.get(c) for c in GEO):
return None
best = None
for ch in GEO:
arr = s[ch]
n = len(arr)
if n == 0:
continue
mean = sum(arr) / n
peak = max(abs(v) for v in arr)
if peak == 0:
continue
ratio = abs(mean) / peak
if best is None or peak > best["peak_counts"]:
best = {"channel": ch, "mean_counts": mean,
"peak_counts": peak, "ratio": ratio}
if best is None:
return None
ts = ev.timestamp
return {
"serial": serial_from_name(p.name) or "?",
"timestamp": (f"{ts.year:04d}-{ts.month:02d}-{ts.day:02d}T"
f"{ts.hour:02d}:{ts.minute:02d}:{ts.second:02d}") if ts else "",
"filename": p.name,
"channel": best["channel"],
"offset_ips": round(counts_to_ips(best["mean_counts"], gr), 4),
"peak_ips": round(counts_to_ips(best["peak_counts"], gr), 4),
"mean_over_peak": round(best["ratio"], 3),
"trigger_level_ips": trig if trig is not None else "",
"geo_range_ips": gr,
}
except Exception:
return None
def main():
ap = argparse.ArgumentParser()
ap.add_argument("--dir", required=True)
ap.add_argument("--jobs", type=int, default=4)
ap.add_argument("--limit", type=int, default=0)
ap.add_argument("--default-trigger", type=float, default=0.2)
ap.add_argument("--out", required=True)
a = ap.parse_args()
# The DL2 export keeps a byte-identical `Sent/` mirror of the root, so
# enumerate paths but keep only the first occurrence of each basename —
# otherwise every event is counted twice.
seen = set()
files = []
for q in sorted(Path(a.dir).rglob("*")):
if q.is_file() and _WAVE_RE.search(q.name) and q.name not in seen:
seen.add(q.name)
files.append(q)
if a.limit:
files = files[: a.limit]
print(f"waveform binaries to scan: {len(files)}", flush=True)
rows = []
with ProcessPoolExecutor(max_workers=a.jobs) as ex:
futs = [ex.submit(scan_one, str(p), a.default_trigger) for p in files]
for n, f in enumerate(as_completed(futs), 1):
r = f.result()
if r:
rows.append(r)
if n % 2000 == 0:
print(f" {n}/{len(files)}", flush=True)
# learn per-serial trigger levels from the rows that had an ASCII
by_serial = defaultdict(list)
for r in rows:
if r["trigger_level_ips"] != "":
by_serial[r["serial"]].append(float(r["trigger_level_ips"]))
med = {}
for k, v in by_serial.items():
v.sort()
med[k] = v[len(v) // 2]
for r in rows:
if r["trigger_level_ips"] == "":
r["trigger_level_ips"] = med.get(r["serial"], a.default_trigger)
r["suspect"] = int(
r["mean_over_peak"] > MEAN_OVER_PEAK_MIN
and abs(r["offset_ips"]) >= TRIGGER_FRACTION * float(r["trigger_level_ips"])
)
cols = ["serial", "timestamp", "filename", "channel", "offset_ips", "peak_ips",
"mean_over_peak", "trigger_level_ips", "geo_range_ips", "suspect"]
with open(a.out, "w", newline="") as fh:
w = csv.DictWriter(fh, fieldnames=cols)
w.writeheader()
w.writerows(rows)
sus = [r for r in rows if r["suspect"]]
print(f"\nscanned {len(rows)} decodable waveforms")
print(f"suspect events: {len(sus)}")
per = defaultdict(int)
for r in sus:
per[r["serial"]] += 1
print(f"units with >=1 suspect event: {len(per)} of {len({r['serial'] for r in rows})}")
for s, n in sorted(per.items(), key=lambda x: -x[1])[:20]:
print(f" {s:10} {n}")
print(f"\nwrote {a.out}")
if __name__ == "__main__":
main()
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#!/usr/bin/env python3
"""Offset detector v2 — per-channel MEDIAN pedestal.
Supersedes the dominant-axis / mean detector in offset_scan.py, which had two
flaws that manufactured false "recoveries":
1. It scored only the axis with the largest peak, so a real event on one axis
hid a persistent pedestal on another. BE12599 2026-08-21 read "clean"
because Long had a 1.065 in/s event, while Tran sat at +0.47 in/s.
2. It used the MEAN, which a real transient perturbs. The median is the
resting baseline: most samples sit at it, so a blast does not move it.
Same event, Long: mean +0.0783 vs median -0.0050.
Flags a CHANNEL when |median| >= --floor in/s (default 0.025 = 5 A/D counts,
Instantel's own criterion; 1 A/D count = 0.005 in/s).
Emits one row per (event, channel) so persistence can be tracked per channel.
"""
from __future__ import annotations
import argparse, csv, re, statistics, sys
from concurrent.futures import ProcessPoolExecutor, as_completed
from pathlib import Path
sys.path.insert(0, str(Path(__file__).resolve().parent.parent))
from minimateplus.event_file_io import read_blastware_file
GEO = ("Tran", "Vert", "Long")
K = 10.0 / 32000.0 # ADC counts -> in/s at the 10 in/s range
_WAVE_RE = re.compile(r"\.[A-Za-z0-9]{2}0[Ww]$")
_STEM_RE = re.compile(r"^([B-Z])(\d{3})")
def serial_from_name(n):
m = _STEM_RE.match(n)
return f"BE{(ord(m.group(1))-ord('B'))*1000+int(m.group(2))}" if m else "?"
def scan_one(ps):
p = Path(ps)
try:
ev = read_blastware_file(p)
s = ev.raw_samples or {}
if not all(s.get(c) for c in GEO):
return None
ts = ev.timestamp
stamp = (f"{ts.year:04d}-{ts.month:02d}-{ts.day:02d}T"
f"{ts.hour:02d}:{ts.minute:02d}:{ts.second:02d}") if ts else ""
out = []
for ch in GEO:
a = s[ch]
out.append({
"serial": serial_from_name(p.name), "timestamp": stamp,
"filename": p.name, "channel": ch,
"median_ips": round(statistics.median(a) * K, 4),
"mean_ips": round(statistics.fmean(a) * K, 4),
"peak_ips": round(max(abs(v) for v in a) * K, 4),
})
return out
except Exception:
return None
def main():
ap = argparse.ArgumentParser()
ap.add_argument("--dir", required=True)
ap.add_argument("--jobs", type=int, default=4)
ap.add_argument("--floor", type=float, default=0.025)
ap.add_argument("--out", required=True)
a = ap.parse_args()
seen, files = set(), []
for q in sorted(Path(a.dir).rglob("*")):
if q.is_file() and _WAVE_RE.search(q.name) and q.name not in seen:
seen.add(q.name); files.append(str(q))
print(f"unique waveform binaries: {len(files)}", flush=True)
rows = []
with ProcessPoolExecutor(max_workers=a.jobs) as ex:
for n, f in enumerate(as_completed([ex.submit(scan_one, p) for p in files]), 1):
r = f.result()
if r: rows.extend(r)
if n % 2000 == 0: print(f" {n}/{len(files)}", flush=True)
for r in rows:
r["offset"] = int(abs(r["median_ips"]) >= a.floor)
cols = ["serial","timestamp","filename","channel","median_ips","mean_ips","peak_ips","offset"]
with open(a.out, "w", newline="") as fh:
w = csv.DictWriter(fh, fieldnames=cols); w.writeheader(); w.writerows(rows)
from collections import defaultdict
ev_flagged = {(r["serial"], r["filename"]) for r in rows if r["offset"]}
ev_all = {(r["serial"], r["filename"]) for r in rows}
per = defaultdict(set)
for r in rows:
if r["offset"]: per[r["serial"]].add(r["filename"])
tot = defaultdict(set)
for r in rows: tot[r["serial"]].add(r["filename"])
print(f"\nfloor = {a.floor} in/s ({a.floor/0.005:.0f} A/D counts)")
print(f"events with >=1 offset channel: {len(ev_flagged)} of {len(ev_all)}")
print(f"units affected: {len(per)} of {len(tot)}")
for s in sorted(per, key=lambda s: -len(per[s])):
print(f" {s:9} {len(per[s]):4} / {len(tot[s]):4} events")
print(f"\nwrote {a.out}")
if __name__ == "__main__":
main()
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#!/usr/bin/env python3
"""Offset detector v3 — pre-trigger floor, with pre/mid/end consistency.
Brian's method, and better than v2's whole-record median for one reason: the
pre-trigger window is *definitionally* quiet (it is the buffer captured before
the trigger fired), whereas a whole-record median is merely robust to the event.
Per channel:
pre = median of the first `pretrig_samples` samples (STRT record)
mid = median of the middle third
end = median of the final third
spread = max(pre,mid,end) - min(pre,mid,end)
A DC offset is a *constant floor*: |pre| at or above the floor AND a small
spread. A transient (settling, handling, a long-tailed event) moves one segment
relative to the others and is rejected by the spread test.
Floor default 0.025 in/s = 5 A/D counts (Instantel's own criterion; 1 count =
0.005 in/s). Quantisation is 0.005 in/s, so `spread` is measured in units of it.
"""
from __future__ import annotations
import argparse, csv, re, statistics, sys
from concurrent.futures import ProcessPoolExecutor, as_completed
from pathlib import Path
sys.path.insert(0, str(Path(__file__).resolve().parent.parent))
from minimateplus.event_file_io import read_blastware_file
GEO=("Tran","Vert","Long"); K=10.0/32000.0
_WAVE=re.compile(r"\.[A-Za-z0-9]{2}0[Ww]$"); _STEM=re.compile(r"^([B-Z])(\d{3})")
_SERIAL_RE = re.compile(rb"\b([A-Z]{2}\d{3,6})\b")
def serial_of(name: str, path=None) -> str:
"""Real serial for a BW file.
The filename encodes only the NUMBER: `<letter><3 digits>` where
letter = chr(ord('B') + serial // 1000). The two-letter family prefix
("BE", "BA", ...) is **not** in the filename, so it must be read out of
the file body. Four units in the DL2 archive are BA, not BE — assuming
"BE" mislabels BA9229, BA10060, BA10895 and BA15957.
"""
m = _STEM.match(name)
if not m:
return "?"
num = (ord(m.group(1)) - ord("B")) * 1000 + int(m.group(2))
if path is not None:
try:
for s in _SERIAL_RE.findall(Path(path).read_bytes()):
s = s.decode()
if s[2:].lstrip("0") == str(num):
return s
except Exception:
pass
return f"BE{num}" # last-resort fallback; prefix unverified
def scan(ps):
p=Path(ps)
try:
ev=read_blastware_file(p); s=ev.raw_samples or {}
if not all(s.get(c) for c in GEO): return None
pre_n=ev.pretrig_samples
ts=ev.timestamp
stamp=(f"{ts.year:04d}-{ts.month:02d}-{ts.day:02d}T"
f"{ts.hour:02d}:{ts.minute:02d}:{ts.second:02d}") if ts else ""
out=[]
for ch in GEO:
a=s[ch]; n=len(a); t=n//3
pre = a[:pre_n] if (pre_n and 0 < pre_n < n) else a[:t]
mid, end = a[t:2*t], a[2*t:]
if not pre or not mid or not end: continue
v=[statistics.median(x)*K for x in (pre,mid,end)]
out.append({"serial":serial_of(p.name, p),"timestamp":stamp,
"filename":p.name,"channel":ch,
"pretrig_n": pre_n or 0,
"pre":round(v[0],4),"mid":round(v[1],4),"end":round(v[2],4),
"spread":round(max(v)-min(v),4),
"peak":round(max(abs(x) for x in a)*K,4)})
return out
except Exception:
return None
def main():
ap=argparse.ArgumentParser()
ap.add_argument("--dir",required=True); ap.add_argument("--jobs",type=int,default=4)
ap.add_argument("--floor",type=float,default=0.025)
ap.add_argument("--max-spread",type=float,default=0.02)
ap.add_argument("--out",required=True)
a=ap.parse_args()
seen=set(); files=[]
for q in sorted(Path(a.dir).rglob("*")):
if q.is_file() and _WAVE.search(q.name) and q.name not in seen:
seen.add(q.name); files.append(str(q))
print(f"unique waveform binaries: {len(files)}",flush=True)
rows=[]
with ProcessPoolExecutor(max_workers=a.jobs) as ex:
for i,f in enumerate(as_completed([ex.submit(scan,p) for p in files]),1):
r=f.result()
if r: rows.extend(r)
if i%2000==0: print(f" {i}/{len(files)}",flush=True)
for r in rows:
r["offset"]=int(abs(r["pre"])>=a.floor and r["spread"]<=a.max_spread)
cols=["serial","timestamp","filename","channel","pretrig_n","pre","mid","end","spread","peak","offset"]
with open(a.out,"w",newline="") as fh:
w=csv.DictWriter(fh,fieldnames=cols); w.writeheader(); w.writerows(rows)
from collections import defaultdict
per=defaultdict(set); tot=defaultdict(set)
for r in rows:
tot[r["serial"]].add(r["filename"])
if r["offset"]: per[r["serial"]].add(r["filename"])
print(f"\nfloor={a.floor} in/s ({a.floor/0.005:.0f} counts) max spread={a.max_spread}")
print(f"units affected: {len(per)} of {len(tot)}")
for s in sorted(per,key=lambda s:-len(per[s])):
print(f" {s:9} {len(per[s]):4} / {len(tot[s]):4} events")
print(f"\nwrote {a.out}")
if __name__=="__main__": main()
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#!/usr/bin/env python3
"""Verify the series-3 decoder against preserved Blastware ASCII exports.
Pairs each `<stem>_<ext>_ASCII.TXT` with its binary `<stem>.<ext>`, decodes the
binary with the production codec, and compares against BW's own export:
waveform — per-channel sample counts, then every sample value
histogram — interval count, then every per-interval channel peak
ADC counts convert as ips = counts * geo_range_ips / 32000 (1 decoder unit =
16 counts = 0.005 in/s at the 10 in/s range; see CLAUDE.md).
Usage:
python scratch/verify_against_ascii.py --dir <path> [--limit N] [--jobs N]
[--out results.json] [--kind w|h|all]
"""
from __future__ import annotations
import argparse, json, re, sys, traceback
from concurrent.futures import ProcessPoolExecutor, as_completed
from pathlib import Path
sys.path.insert(0, str(Path(__file__).resolve().parent.parent))
from minimateplus.event_file_io import read_blastware_file
from minimateplus.bw_ascii_report import parse_report_file, parse_report
GEO = ("Tran", "Vert", "Long")
_GEO_FS_COUNTS = 32000.0
_ASCII_SUFFIX_RE = re.compile(r"_ASCII\.TXT$", re.IGNORECASE)
def binary_for(ascii_path: Path) -> Path:
"""H907KXOW_WC0H_ASCII.TXT -> H907KXOW.WC0H"""
stem = _ASCII_SUFFIX_RE.sub("", ascii_path.name)
if "_" not in stem:
return ascii_path.with_name(stem)
head, _, ext = stem.rpartition("_")
return ascii_path.with_name(f"{head}.{ext}")
def counts_to_ips(counts, geo_range_ips):
r = geo_range_ips if geo_range_ips else 10.0
return counts * r / _GEO_FS_COUNTS
def agrees(got, exp, geo_range_ips, tol=0.0006):
"""True when decoded `got` matches BW's exported `exp`.
Saturation carve-out: when an event clips, BW clamps its export to the
channel's range maximum (and writes OORANGE for the summary PPV), while
the decoder faithfully reproduces raw counts that can sit a decoder unit
or two past nominal full scale (32016 counts observed = 10.005 in/s on
the 10 in/s range). Same sign and both at/above the ceiling is agreement,
not a decode error.
"""
if abs(got - exp) <= tol:
return True
r = geo_range_ips if geo_range_ips else 10.0
if abs(exp) >= r - tol and abs(got) >= r - tol and (got >= 0) == (exp >= 0):
return True
return False
def parse_interval_table(text: str):
"""Histogram interval rows: time, Tpk, Tfq, Vpk, Vfq, Lpk, Lfq, PVS, ..., micdB, micfq"""
rows = []
seen_header = False
for line in text.splitlines():
if "\t" not in line:
continue
cols = [c.strip().strip('"') for c in line.split("\t")]
cols = [c for c in cols if c != ""]
if not seen_header:
if any(c in ("Tran", "Vert", "Long") for c in cols):
seen_header = True
continue
if len(cols) < 7:
continue
if not re.match(r"^\d{1,2}:\d{2}:\d{2}$", cols[0]):
continue
def num(s):
try:
return float(s)
except ValueError:
return None
rows.append({"time": cols[0], "Tran": num(cols[1]),
"Vert": num(cols[3]), "Long": num(cols[5])})
return rows
def check_one(ascii_path_str: str) -> dict:
ap = Path(ascii_path_str)
bp = binary_for(ap)
res = {"ascii": ap.name, "binary": bp.name, "status": "?",
"kind": None, "detail": ""}
try:
if not bp.exists():
res["status"] = "no_binary"
return res
text = ap.read_text(errors="replace")
rep = parse_report(text, parse_samples=True)
ev = read_blastware_file(bp)
gr = rep.geo_range_ips
res["kind"] = kind = ("histogram"
if (rep.event_type or "").lower().startswith(("full histogram", "histogram"))
else "waveform")
samples = ev.raw_samples or {}
dec_n = {c: len(samples.get(c) or []) for c in GEO}
if kind == "histogram":
rows = parse_interval_table(text)
res["n_ascii"] = len(rows)
res["n_decoded"] = dec_n["Tran"]
if not rows:
res["status"] = "no_ascii_table"
return res
if dec_n["Tran"] == 0:
res["status"] = "decode_empty"
return res
if dec_n["Tran"] != len(rows):
res["status"] = "count_mismatch"
res["detail"] = f"decoded {dec_n['Tran']} vs ascii {len(rows)}"
return res
bad = 0
worst = 0.0
for i, row in enumerate(rows):
for ch in GEO:
exp = row[ch]
if exp is None:
continue
got = counts_to_ips(samples[ch][i], gr)
if not agrees(got, exp, gr):
bad += 1
worst = max(worst, abs(got - exp))
res["worst_abs"] = round(worst, 6)
res["status"] = "exact" if bad == 0 else "value_mismatch"
if bad:
res["detail"] = f"{bad} interval-channel values off"
return res
# waveform
asc = rep.samples or []
res["n_ascii"] = len(asc)
res["n_decoded"] = dec_n["Tran"]
if not asc:
res["status"] = "no_ascii_table"
return res
if dec_n["Tran"] == 0:
res["status"] = "decode_empty"
return res
if len({dec_n[c] for c in GEO}) != 1:
res["status"] = "channel_len_mismatch"
res["detail"] = str(dec_n)
return res
if dec_n["Tran"] != len(asc):
res["status"] = "count_mismatch"
res["detail"] = f"decoded {dec_n['Tran']} vs ascii {len(asc)}"
return res
bad = 0
worst = 0.0
for i, quad in enumerate(asc):
for j, ch in enumerate(GEO):
exp = quad[j]
got = counts_to_ips(samples[ch][i], gr)
if not agrees(got, exp, gr):
bad += 1
worst = max(worst, abs(got - exp))
res["worst_abs"] = round(worst, 6)
res["status"] = "exact" if bad == 0 else "value_mismatch"
if bad:
res["detail"] = f"{bad} sample values off"
return res
except Exception as e:
res["status"] = "error"
res["detail"] = f"{type(e).__name__}: {e}"
return res
def main():
ap = argparse.ArgumentParser()
ap.add_argument("--dir", required=True)
ap.add_argument("--limit", type=int, default=0)
ap.add_argument("--jobs", type=int, default=8)
ap.add_argument("--kind", choices=["w", "h", "all"], default="all")
ap.add_argument("--out", default=None)
a = ap.parse_args()
root = Path(a.dir)
files = sorted(p for p in root.rglob("*")
if p.is_file() and p.name.upper().endswith("_ASCII.TXT"))
if a.kind != "all":
want = "0W" if a.kind == "w" else "0H"
files = [p for p in files
if _ASCII_SUFFIX_RE.sub("", p.name).upper().endswith(want)]
if a.limit:
files = files[: a.limit]
print(f"pairs to check: {len(files)}", flush=True)
out = []
from collections import Counter
tally = Counter()
with ProcessPoolExecutor(max_workers=a.jobs) as ex:
futs = {ex.submit(check_one, str(p)): p for p in files}
for n, f in enumerate(as_completed(futs), 1):
r = f.result()
out.append(r)
tally[(r["kind"], r["status"])] += 1
if n % 500 == 0:
print(f" {n}/{len(files)}", flush=True)
print("\n=== results ===")
for (kind, status), n in sorted(tally.items(), key=lambda x: -x[1]):
print(f" {str(kind):10} {status:22} {n}")
if a.out:
Path(a.out).write_text(json.dumps(out, indent=1))
print(f"\nwrote {a.out}")
if __name__ == "__main__":
main()
+17 -6
View File
@@ -1,12 +1,12 @@
#!/usr/bin/env python3 #!/usr/bin/env python3
"""Backfill events.shape_* from each event's .h5 waveform samples. Idempotent.""" """Backfill events.shape_* and shape_offset_* from each event's .h5 samples. Idempotent."""
from __future__ import annotations from __future__ import annotations
import argparse, logging, sys import argparse, logging, sys
from pathlib import Path from pathlib import Path
sys.path.insert(0, str(Path(__file__).resolve().parent.parent)) sys.path.insert(0, str(Path(__file__).resolve().parent.parent))
from sfm.database import SeismoDb from sfm.database import SeismoDb
from sfm.waveform_store import WaveformStore from sfm.waveform_store import WaveformStore
from sfm.shape_metrics import shape_from_h5 from sfm.shape_metrics import shape_from_h5, offset_from_h5
log = logging.getLogger("backfill_event_shape") log = logging.getLogger("backfill_event_shape")
@@ -21,6 +21,7 @@ def backfill_shape(db: SeismoDb, store: WaveformStore, *, dry_run: bool = False)
if not h5_path.exists(): if not h5_path.exists():
counts["skipped_no_h5"] += 1; continue counts["skipped_no_h5"] += 1; continue
shape = shape_from_h5(h5_path) shape = shape_from_h5(h5_path)
offset = offset_from_h5(h5_path)
if shape is None: if shape is None:
# The .h5 can no longer yield a shape (fewer than 2 samples, or a # The .h5 can no longer yield a shape (fewer than 2 samples, or a
# flat trace). Clear any previously stored value rather than # flat trace). Clear any previously stored value rather than
@@ -28,22 +29,32 @@ def backfill_shape(db: SeismoDb, store: WaveformStore, *, dry_run: bool = False)
# from and silently feeds the false-trigger detector. Seen after # from and silently feeds the false-trigger detector. Seen after
# a decoder fix shrinks an event: 493 rows in the prod snapshot # a decoder fix shrinks an event: 493 rows in the prod snapshot
# were carrying metrics from a superseded decode (2026-08-25). # were carrying metrics from a superseded decode (2026-08-25).
if row.get("shape_crest_factor") is not None: if (row.get("shape_crest_factor") is not None
or row.get("shape_offset") is not None):
if not dry_run: if not dry_run:
with db._connect() as conn: with db._connect() as conn:
conn.execute( conn.execute(
"UPDATE events SET shape_crest_factor=NULL, " "UPDATE events SET shape_crest_factor=NULL, "
"shape_near_peak_count=NULL, shape_sample_count=NULL, " "shape_near_peak_count=NULL, shape_sample_count=NULL, "
"shape_axis=NULL WHERE id=?", (row["id"],)) "shape_axis=NULL, shape_offset=NULL, shape_offset_axis=NULL, "
"shape_offset_pre=NULL, shape_offset_spread=NULL WHERE id=?",
(row["id"],))
counts["cleared_stale"] += 1 counts["cleared_stale"] += 1
counts["skipped_no_samples"] += 1; continue counts["skipped_no_samples"] += 1; continue
if not dry_run: if not dry_run:
with db._connect() as conn: with db._connect() as conn:
conn.execute( conn.execute(
"UPDATE events SET shape_crest_factor=?, shape_near_peak_count=?, " "UPDATE events SET shape_crest_factor=?, shape_near_peak_count=?, "
"shape_sample_count=?, shape_axis=? WHERE id=?", "shape_sample_count=?, shape_axis=?, shape_offset=?, "
"shape_offset_axis=?, shape_offset_pre=?, shape_offset_spread=? "
"WHERE id=?",
(shape["crest_factor"], shape["near_peak_count"], (shape["crest_factor"], shape["near_peak_count"],
shape["sample_count"], shape["axis"], row["id"])) shape["sample_count"], shape["axis"],
(1 if offset["offset"] else 0) if offset else None,
offset["axis"] if offset else None,
offset["pre"] if offset else None,
offset["spread"] if offset else None,
row["id"]))
counts["updated"] += 1 counts["updated"] += 1
log.info("backfill_shape: %s", counts) log.info("backfill_shape: %s", counts)
return counts return counts
+130 -42
View File
@@ -82,6 +82,7 @@ CREATE TABLE IF NOT EXISTS events (
record_type TEXT, -- "single_shot" | "continuous" record_type TEXT, -- "single_shot" | "continuous"
false_trigger INTEGER NOT NULL DEFAULT 0, -- 0=no, 1=yes (manual flag) false_trigger INTEGER NOT NULL DEFAULT 0, -- 0=no, 1=yes (manual flag)
reviewed_real INTEGER NOT NULL DEFAULT 0, -- 0=no, 1=operator-confirmed real (mutually exclusive with false_trigger) reviewed_real INTEGER NOT NULL DEFAULT 0, -- 0=no, 1=operator-confirmed real (mutually exclusive with false_trigger)
false_trigger_reason TEXT, -- optional FT cause ("offset", ...); NULL = none. Only meaningful when false_trigger=1.
blastware_filename TEXT, -- event file within waveform store; extension is per-event (AB0T encodes timestamp) blastware_filename TEXT, -- event file within waveform store; extension is per-event (AB0T encodes timestamp)
blastware_filesize INTEGER, -- bytes; NULL if no event file saved blastware_filesize INTEGER, -- bytes; NULL if no event file saved
a5_pickle_filename TEXT, -- "<filename>.a5.pkl" sidecar a5_pickle_filename TEXT, -- "<filename>.a5.pkl" sidecar
@@ -99,6 +100,10 @@ CREATE TABLE IF NOT EXISTS events (
shape_near_peak_count INTEGER, -- samples >= 0.5 * peak (FT: few; real: many) shape_near_peak_count INTEGER, -- samples >= 0.5 * peak (FT: few; real: many)
shape_sample_count INTEGER, -- total samples (to normalize near_peak_count) shape_sample_count INTEGER, -- total samples (to normalize near_peak_count)
shape_axis TEXT, -- geophone channel measured ("Tran"/"Vert"/"Long") shape_axis TEXT, -- geophone channel measured ("Tran"/"Vert"/"Long")
shape_offset INTEGER, -- 1 = DC-offset false trigger (pre-trigger baseline off zero + flat). Meaningful for waveforms only.
shape_offset_axis TEXT, -- geo channel the offset was measured on
shape_offset_pre REAL, -- pre-trigger baseline median (in/s)
shape_offset_spread REAL, -- max(pre,mid,end) - min(...) in in/s; small = constant/DC
created_at TEXT NOT NULL DEFAULT (strftime('%Y-%m-%dT%H:%M:%SZ', 'now')), created_at TEXT NOT NULL DEFAULT (strftime('%Y-%m-%dT%H:%M:%SZ', 'now')),
UNIQUE(serial, timestamp) UNIQUE(serial, timestamp)
); );
@@ -225,7 +230,12 @@ class SeismoDb:
("shape_near_peak_count", "INTEGER"), ("shape_near_peak_count", "INTEGER"),
("shape_sample_count", "INTEGER"), ("shape_sample_count", "INTEGER"),
("shape_axis", "TEXT"), ("shape_axis", "TEXT"),
("shape_offset", "INTEGER"),
("shape_offset_axis", "TEXT"),
("shape_offset_pre", "REAL"),
("shape_offset_spread", "REAL"),
("reviewed_real", "INTEGER NOT NULL DEFAULT 0"), ("reviewed_real", "INTEGER NOT NULL DEFAULT 0"),
("false_trigger_reason", "TEXT"),
): ):
if col not in existing_cols: if col not in existing_cols:
log.info("_migrate: events ADD COLUMN %s %s", col, ddl) log.info("_migrate: events ADD COLUMN %s %s", col, ddl)
@@ -430,9 +440,11 @@ class SeismoDb:
tran_zc_above_range, vert_zc_above_range, tran_zc_above_range, vert_zc_above_range,
long_zc_above_range, mic_zc_above_range, long_zc_above_range, mic_zc_above_range,
shape_crest_factor, shape_near_peak_count, shape_crest_factor, shape_near_peak_count,
shape_sample_count, shape_axis) shape_sample_count, shape_axis,
shape_offset, shape_offset_axis,
shape_offset_pre, shape_offset_spread)
VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?,
?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?) ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
""", """,
( (
self._new_id(), serial, key, session_id, ts, self._new_id(), serial, key, session_id, ts,
@@ -464,6 +476,10 @@ class SeismoDb:
rec.get("shape_near_peak_count"), rec.get("shape_near_peak_count"),
rec.get("shape_sample_count"), rec.get("shape_sample_count"),
rec.get("shape_axis"), rec.get("shape_axis"),
rec.get("shape_offset"),
rec.get("shape_offset_axis"),
rec.get("shape_offset_pre"),
rec.get("shape_offset_spread"),
), ),
) )
inserted += 1 inserted += 1
@@ -517,7 +533,11 @@ class SeismoDb:
shape_crest_factor = COALESCE(?, shape_crest_factor), shape_crest_factor = COALESCE(?, shape_crest_factor),
shape_near_peak_count = COALESCE(?, shape_near_peak_count), shape_near_peak_count = COALESCE(?, shape_near_peak_count),
shape_sample_count = COALESCE(?, shape_sample_count), shape_sample_count = COALESCE(?, shape_sample_count),
shape_axis = COALESCE(?, shape_axis) shape_axis = COALESCE(?, shape_axis),
shape_offset = COALESCE(?, shape_offset),
shape_offset_axis = COALESCE(?, shape_offset_axis),
shape_offset_pre = COALESCE(?, shape_offset_pre),
shape_offset_spread = COALESCE(?, shape_offset_spread)
WHERE serial = ? AND timestamp = ? WHERE serial = ? AND timestamp = ?
""", """,
( (
@@ -549,6 +569,10 @@ class SeismoDb:
rec.get("shape_near_peak_count") if rec else None, rec.get("shape_near_peak_count") if rec else None,
rec.get("shape_sample_count") if rec else None, rec.get("shape_sample_count") if rec else None,
rec.get("shape_axis") if rec else None, rec.get("shape_axis") if rec else None,
rec.get("shape_offset") if rec else None,
rec.get("shape_offset_axis") if rec else None,
rec.get("shape_offset_pre") if rec else None,
rec.get("shape_offset_spread") if rec else None,
serial, serial,
ts, ts,
), ),
@@ -603,61 +627,116 @@ class SeismoDb:
).fetchall() ).fetchall()
return [dict(r) for r in rows] return [dict(r) for r in rows]
def find_twins(self, event_id: str, *, window_seconds: int = 300) -> list[dict]: def find_twins(self, event_id: str, *, window_seconds: int | None = None) -> list[dict]:
""" """
Find this event's histogram/waveform twin(s): rows sharing the same Find this event's histogram/waveform twin(s): the SAME physical event
serial and an identical peak_vector_sum, whose timestamp falls recorded both as a scheduled histogram and as a triggered waveform.
within ``window_seconds`` of this event's timestamp. Excludes the
event itself. Returns [] if the event or any required field
(serial / peak_vector_sum / timestamp) is missing.
Caveat: identical-PVS matching is a proxy for "same physical event A real trigger is captured twice — once as a triggered waveform (stamped
recorded twice," not a guarantee. In the rare case where the device at the trigger instant) and once inside the scheduled histogram whose
clamps/saturates PVS (clamped to sqrt(3) * geo_range), two distinct interval contains it (stamped at the histogram's interval start, e.g. the
saturated events on the same serial within the window can share the 7am/7pm call-in). The two can be HOURS apart in time yet report the same
same clamped PVS value and be matched as twins even though they are serial and identical peak_vector_sum. Twins are therefore matched by:
different events. This is harmless in practice — false_trigger/
reviewed_real are derived/index columns re-derivable from the * same serial,
sidecar source of truth — but worth knowing if twin counts look * identical peak_vector_sum,
surprising on a saturated/clamped run. * OPPOSITE record type (one histogram, one waveform), and
* the waveform's timestamp falls within the histogram's interval —
from a histogram's timestamp up to the next histogram (same serial).
This replaces the old ±``window_seconds`` heuristic, which silently
missed twins more than a few minutes apart (a histogram's interval-start
stamp and the trigger instant routinely differ by hours). ``window_seconds``
is still accepted for backward compatibility but is ignored.
Returns [] if the event or a required field (serial / peak_vector_sum /
timestamp) is missing.
Caveat: identical-PVS matching remains a proxy for "same physical event"
— if the device clamps/saturates PVS (to sqrt(3) * geo_range), two
distinct saturated events could share a PVS. The added opposite-type and
interval constraints make a false pairing far less likely than the old
time-window match, and false_trigger/reviewed_real stay re-derivable from
the sidecar source of truth.
""" """
def _parse(ts):
if not ts:
return None
try:
return datetime.datetime.fromisoformat(str(ts).replace(" ", "T"))
except ValueError:
return None
def _is_hist(rt):
return str(rt or "").lower().startswith("hist")
row = self.get_event(event_id) row = self.get_event(event_id)
if not row: if not row:
return [] return []
serial = row.get("serial"); pvs = row.get("peak_vector_sum"); ts = row.get("timestamp") serial = row.get("serial"); pvs = row.get("peak_vector_sum")
if serial is None or pvs is None or not ts: t_target = _parse(row.get("timestamp"))
if serial is None or pvs is None or t_target is None:
return [] return []
try: target_hist = _is_hist(row.get("record_type"))
t = datetime.datetime.fromisoformat(ts.replace(" ", "T"))
except ValueError:
return []
lo = (t - datetime.timedelta(seconds=window_seconds)).isoformat()
hi = (t + datetime.timedelta(seconds=window_seconds)).isoformat()
with self._connect() as conn:
rows = conn.execute(
"SELECT * FROM events WHERE serial=? AND id!=? AND peak_vector_sum=? "
"AND timestamp BETWEEN ? AND ?",
(serial, event_id, pvs, lo, hi),
).fetchall()
return [dict(r) for r in rows]
def propagate_review_to_twins(self, event_id: str, *, window_seconds: int = 300) -> list[str]: with self._connect() as conn:
cand_rows = [dict(r) for r in conn.execute(
"SELECT * FROM events WHERE serial=? AND id!=? AND peak_vector_sum=?",
(serial, event_id, pvs)).fetchall()]
hist_ts = [r["timestamp"] for r in conn.execute(
"SELECT timestamp FROM events WHERE serial=? AND lower(record_type) LIKE 'hist%'",
(serial,)).fetchall()]
# Histogram interval-start times for this serial, sorted, to bound intervals.
starts = sorted(x for x in (_parse(t) for t in hist_ts) if x is not None)
def _interval_end(h_start):
# The next histogram strictly after h_start bounds the interval; else open-ended.
for x in starts:
if x > h_start:
return x
return None
def _covers(h_start, w_time):
end = _interval_end(h_start)
return h_start <= w_time and (end is None or w_time < end)
twins = []
for c in cand_rows:
if _is_hist(c.get("record_type")) == target_hist:
continue # twins are strictly cross-type (one histogram, one waveform)
c_time = _parse(c.get("timestamp"))
if c_time is None:
continue
h_start, w_time = (t_target, c_time) if target_hist else (c_time, t_target)
if _covers(h_start, w_time):
twins.append(c)
return twins
def propagate_review_to_twins(self, event_id: str, *, window_seconds: int | None = None) -> list[str]:
""" """
Copy this event's `false_trigger`/`reviewed_real` columns onto each Copy this event's `false_trigger`/`reviewed_real`/`false_trigger_reason`
of its histogram/waveform twins (see `find_twins`), so flagging one columns onto each of its histogram/waveform twins (see `find_twins`), so
twin flags both. Returns the list of twin ids updated. flagging one twin flags both. Returns the list of twin ids updated.
``window_seconds`` is accepted for backward compatibility but ignored;
twin matching is now interval-based (see `find_twins`).
""" """
row = self.get_event(event_id) row = self.get_event(event_id)
if not row: if not row:
return [] return []
ft = 1 if row.get("false_trigger") else 0 ft = 1 if row.get("false_trigger") else 0
real = 1 if row.get("reviewed_real") else 0 real = 1 if row.get("reviewed_real") else 0
twins = self.find_twins(event_id, window_seconds=window_seconds) # The reason is a subtype of the FT flag — carry it only when the source
# is actually a false trigger, so a confirmed-real twin never keeps one.
reason = row.get("false_trigger_reason") if ft else None
twins = self.find_twins(event_id)
moved = [] moved = []
with self._connect() as conn: with self._connect() as conn:
for tw in twins: for tw in twins:
conn.execute("UPDATE events SET false_trigger=?, reviewed_real=? WHERE id=?", conn.execute(
(ft, real, tw["id"])) "UPDATE events SET false_trigger=?, reviewed_real=?, false_trigger_reason=? WHERE id=?",
(ft, real, reason, tw["id"]))
moved.append(tw["id"]) moved.append(tw["id"])
return moved return moved
@@ -678,7 +757,7 @@ class SeismoDb:
) )
else: else:
cur = conn.execute( cur = conn.execute(
"UPDATE events SET false_trigger=0 WHERE id=?", "UPDATE events SET false_trigger=0, false_trigger_reason=NULL WHERE id=?",
(event_id,), (event_id,),
) )
return cur.rowcount > 0 return cur.rowcount > 0
@@ -772,7 +851,8 @@ class SeismoDb:
return False return False
has_ft = "false_trigger" in review has_ft = "false_trigger" in review
has_real = "reviewed_real" in review has_real = "reviewed_real" in review
if not has_ft and not has_real: has_reason = "false_trigger_reason" in review
if not has_ft and not has_real and not has_reason:
# Nothing derived to update; just confirm the row exists. # Nothing derived to update; just confirm the row exists.
with self._connect() as conn: with self._connect() as conn:
row = conn.execute( row = conn.execute(
@@ -785,11 +865,19 @@ class SeismoDb:
sets["false_trigger"] = 1 if review.get("false_trigger") else 0 sets["false_trigger"] = 1 if review.get("false_trigger") else 0
if has_real: if has_real:
sets["reviewed_real"] = 1 if review.get("reviewed_real") else 0 sets["reviewed_real"] = 1 if review.get("reviewed_real") else 0
if has_reason:
reason = review.get("false_trigger_reason") or None
sets["false_trigger_reason"] = reason
if reason: # a reason is a subtype of FT → implies FT
sets["false_trigger"] = 1
# mutual exclusivity: a true in one forces the other column to 0 # mutual exclusivity: a true in one forces the other column to 0
if sets.get("false_trigger") == 1: if sets.get("false_trigger") == 1:
sets["reviewed_real"] = 0 sets["reviewed_real"] = 0
if sets.get("reviewed_real") == 1: if sets.get("reviewed_real") == 1:
sets["false_trigger"] = 0 sets["false_trigger"] = 0
# the reason is only meaningful while flagged FT — clear it if FT ends up 0
if sets.get("false_trigger") == 0:
sets["false_trigger_reason"] = None
assign = ", ".join(f"{k}=?" for k in sets) assign = ", ".join(f"{k}=?" for k in sets)
params = list(sets.values()) + [event_id] params = list(sets.values()) + [event_id]
with self._connect() as conn: with self._connect() as conn:
+3 -2
View File
@@ -67,6 +67,7 @@ from minimateplus.blastware_file import write_blastware_file, blastware_filename
from minimateplus.client import _decode_a5_metadata_into, _decode_a5_waveform, _decode_event_count from minimateplus.client import _decode_a5_metadata_into, _decode_a5_waveform, _decode_event_count
from minimateplus.framing import build_bw_write_frame, SESSION_RESET, POLL_PROBE, POLL_DATA from minimateplus.framing import build_bw_write_frame, SESSION_RESET, POLL_PROBE, POLL_DATA
from minimateplus.protocol import SUB_STOP_MONITORING from minimateplus.protocol import SUB_STOP_MONITORING
from minimateplus.event_file_io import TOOL_VERSION as SFM_VERSION # single source for the service version (release-bumped)
from sfm import event_hdf5 from sfm import event_hdf5
from sfm.cache import SFMCache, get_cache from sfm.cache import SFMCache, get_cache
from sfm.database import SeismoDb from sfm.database import SeismoDb
@@ -90,7 +91,7 @@ app = FastAPI(
"Implements the minimateplus RS-232 protocol library.\n" "Implements the minimateplus RS-232 protocol library.\n"
"Proxied by terra-view at /api/sfm/*." "Proxied by terra-view at /api/sfm/*."
), ),
version="0.26.0", version=SFM_VERSION,
) )
# Allow requests from the waveform viewer opened as a local file (file://) # Allow requests from the waveform viewer opened as a local file (file://)
@@ -371,7 +372,7 @@ def _backfill_events(events: list, info: "DeviceInfo") -> None:
@app.get("/health") @app.get("/health")
def health() -> dict: def health() -> dict:
"""Service heartbeat. No device I/O.""" """Service heartbeat. No device I/O."""
return {"status": "ok", "service": "sfm", "version": "0.1.0"} return {"status": "ok", "service": "sfm", "version": SFM_VERSION}
@app.get("/", response_class=FileResponse) @app.get("/", response_class=FileResponse)
+69
View File
@@ -47,6 +47,60 @@ def shape_from_samples(chans: dict) -> dict | None:
return s return s
# ── Offset (DC-baseline) detection ────────────────────────────────────────────
# A DC offset is a false trigger where the geophone baseline sits at a constant
# non-zero floor (sensor bumped / settled / drifted) instead of oscillating
# around zero. Brian's method (validated in scratch/offset_scan3.py): the
# pre-trigger window is definitionally quiet, so a true offset shows |pre| off
# zero AND stays flat across the record (pre ≈ mid ≈ end). A transient moves one
# third relative to the others and is rejected by the spread test.
# Thresholds are in in/s (the .h5 samples are already range-scaled); validated at
# Normal range (10 in/s) — the only range in the fleet.
OFFSET_FLOOR = 0.025 # |pre| at/above this reads as an off-zero baseline (5 A/D counts)
OFFSET_MAX_SPREAD = 0.02 # max(pre,mid,end) - min(...) at/below this reads as flat/constant
def _channel_offset(x, pretrig_n):
"""Return (pre, spread, is_offset) for one channel, or None if unusable."""
x = np.asarray(x, dtype=float)
n = x.size
if n < 3:
return None
t = n // 3
pre = x[:pretrig_n] if (pretrig_n and 0 < pretrig_n < n) else x[:t]
mid, end = x[t:2 * t], x[2 * t:]
if pre.size == 0 or mid.size == 0 or end.size == 0:
return None
vals = [float(np.median(seg)) for seg in (pre, mid, end)]
spread = max(vals) - min(vals)
is_offset = abs(vals[0]) >= OFFSET_FLOOR and spread <= OFFSET_MAX_SPREAD
return vals[0], spread, is_offset
def offset_from_samples(chans: dict, pretrig_n) -> dict | None:
"""Detect a DC-offset false trigger across the geophone channels.
An event is offset if ANY geo channel's pre-trigger baseline is off zero and
flat across the record. Reports the tripping axis (or, if none trips, the
most-offset-like axis) with its ``pre``/``spread`` for transparency + tuning.
Returns None when no geo channel is usable.
"""
results = []
for ax in _GEO_CHANNELS:
x = chans.get(ax)
if x is None:
continue
r = _channel_offset(x, pretrig_n)
if r is not None:
results.append((ax, r[0], r[1], r[2]))
if not results:
return None
offenders = [r for r in results if r[3]]
ax, pre, spread, _ = max(offenders or results, key=lambda r: abs(r[1]))
return {"offset": bool(offenders), "axis": ax,
"pre": round(pre, 6), "spread": round(spread, 6)}
def shape_from_h5(path) -> dict | None: def shape_from_h5(path) -> dict | None:
import h5py import h5py
try: try:
@@ -56,3 +110,18 @@ def shape_from_h5(path) -> dict | None:
except Exception: except Exception:
return None return None
return shape_from_samples(chans) return shape_from_samples(chans)
def offset_from_h5(path) -> dict | None:
"""offset_from_samples fed from an event's .h5 (float32 in/s geo samples +
the pretrig_samples attribute)."""
import h5py
try:
with h5py.File(path, "r") as f:
chans = {ax: f[f"samples/{ax}"][:] for ax in _GEO_CHANNELS
if f"samples/{ax}" in f}
pretrig_n = f.attrs.get("pretrig_samples")
except Exception:
return None
pretrig_n = int(pretrig_n) if pretrig_n is not None else 0
return offset_from_samples(chans, pretrig_n)
+86 -11
View File
@@ -32,6 +32,7 @@ from __future__ import annotations
import datetime import datetime
import logging import logging
import pickle import pickle
import re
import shutil import shutil
from pathlib import Path from pathlib import Path
from typing import Optional, Union from typing import Optional, Union
@@ -41,7 +42,7 @@ from minimateplus.blastware_file import blastware_filename, write_blastware_file
from minimateplus.framing import S3Frame from minimateplus.framing import S3Frame
from minimateplus.models import Event from minimateplus.models import Event
from sfm import event_hdf5 from sfm import event_hdf5
from sfm.shape_metrics import shape_from_h5 from sfm.shape_metrics import shape_from_h5, offset_from_h5
log = logging.getLogger("sfm.waveform_store") log = logging.getLogger("sfm.waveform_store")
@@ -270,6 +271,13 @@ class WaveformStore:
"shape_sample_count": _shape["sample_count"], "shape_sample_count": _shape["sample_count"],
"shape_axis": _shape["axis"], "shape_axis": _shape["axis"],
} if _shape else {} } if _shape else {}
_offset = offset_from_h5(hdf5_path) if hdf5_filename else None
_offset_rec = {
"shape_offset": 1 if _offset["offset"] else 0,
"shape_offset_axis": _offset["axis"],
"shape_offset_pre": _offset["pre"],
"shape_offset_spread": _offset["spread"],
} if _offset else {}
return { return {
"filename": filename, "filename": filename,
"filesize": filesize, "filesize": filesize,
@@ -278,6 +286,7 @@ class WaveformStore:
"hdf5_filename": hdf5_filename, "hdf5_filename": hdf5_filename,
"sidecar_filename": sidecar_path.name, "sidecar_filename": sidecar_path.name,
**_shape_rec, **_shape_rec,
**_offset_rec,
} }
def save_imported_bw( def save_imported_bw(
@@ -371,8 +380,16 @@ class WaveformStore:
# Resolve serial. blastware_filename derives a 4-char prefix from # Resolve serial. blastware_filename derives a 4-char prefix from
# the numeric serial (e.g. BE11529 → M529); we go the other way # the numeric serial (e.g. BE11529 → M529); we go the other way
# via the source filename if a hint wasn't given. # if a hint wasn't given. The filename carries only the NUMBER,
serial = serial_hint or _serial_from_bw_filename(source_path.name) or "UNKNOWN" # so read the family prefix out of the body first — a BlastMate
# ("BA") filed as "BE" is a unit that does not exist. The
# filename-only decoder stays as the last resort.
serial = (
serial_hint
or _serial_from_bw_bytes(bw_bytes, source_path.name)
or _serial_from_bw_filename(source_path.name)
or "UNKNOWN"
)
# Use the source filename verbatim — it already encodes timestamp # Use the source filename verbatim — it already encodes timestamp
# + record type per BW's AB0T scheme, and we want to preserve it # + record type per BW's AB0T scheme, and we want to preserve it
@@ -461,6 +478,13 @@ class WaveformStore:
"shape_sample_count": _shape["sample_count"], "shape_sample_count": _shape["sample_count"],
"shape_axis": _shape["axis"], "shape_axis": _shape["axis"],
} if _shape else {} } if _shape else {}
_offset = offset_from_h5(hdf5_path) if hdf5_filename else None
_offset_rec = {
"shape_offset": 1 if _offset["offset"] else 0,
"shape_offset_axis": _offset["axis"],
"shape_offset_pre": _offset["pre"],
"shape_offset_spread": _offset["spread"],
} if _offset else {}
return ev, { return ev, {
"filename": filename, "filename": filename,
"filesize": filesize, "filesize": filesize,
@@ -470,6 +494,7 @@ class WaveformStore:
"sidecar_filename": sidecar_path.name, "sidecar_filename": sidecar_path.name,
"serial": serial, "serial": serial,
**_shape_rec, **_shape_rec,
**_offset_rec,
} }
def save_imported_idf( def save_imported_idf(
@@ -751,6 +776,13 @@ class WaveformStore:
"shape_sample_count": _shape["sample_count"], "shape_sample_count": _shape["sample_count"],
"shape_axis": _shape["axis"], "shape_axis": _shape["axis"],
} if _shape else {} } if _shape else {}
_offset = offset_from_h5(hdf5_path) if hdf5_filename else None
_offset_rec = {
"shape_offset": 1 if _offset["offset"] else 0,
"shape_offset_axis": _offset["axis"],
"shape_offset_pre": _offset["pre"],
"shape_offset_spread": _offset["spread"],
} if _offset else {}
return ev, { return ev, {
"filename": filename, "filename": filename,
"filesize": filesize, "filesize": filesize,
@@ -760,6 +792,7 @@ class WaveformStore:
"sidecar_filename": sidecar_path.name, "sidecar_filename": sidecar_path.name,
"serial": serial, "serial": serial,
**_shape_rec, **_shape_rec,
**_offset_rec,
} }
def load_a5(self, serial: str, filename: str) -> Optional[list[S3Frame]]: def load_a5(self, serial: str, filename: str) -> Optional[list[S3Frame]]:
@@ -816,20 +849,24 @@ class WaveformStore:
# ── helpers ───────────────────────────────────────────────────────────────────── # ── helpers ─────────────────────────────────────────────────────────────────────
def _serial_from_bw_filename(name: str) -> Optional[str]: def _serial_number_from_bw_filename(name: str) -> Optional[int]:
""" """
Reverse of `blastware_filename`'s serial-prefix encoding. Reverse of `blastware_filename`'s serial-prefix encoding — the NUMBER only.
BW filename format (V10.72): `<P><serial3><stem4>.<ext>` BW filename format (V10.72): `<P><serial3><stem4>.<ext>`
where P = chr(ord('B') + floor(serial // 1000)) where P = chr(ord('B') + floor(serial // 1000))
and serial3 = f"{serial % 1000:03d}". and serial3 = f"{serial % 1000:03d}".
Examples (from CLAUDE.md verification archive): Examples (from CLAUDE.md verification archive):
P036... → BE14036 H907... → BE6907 P036... → 14036 H907... → 6907
M529... → BE11529 T003... → BE18003 M529... → 11529 T003... → 18003
L895... → 10895
Returns the inferred BE-prefix serial (e.g. "BE11529") or None when ⚠ The filename encodes **only the number**. The two-letter family
the filename doesn't match the expected pattern. prefix is NOT in it — "BE" is a MiniMate Plus, "BA" a BlastMate — so
the prefix has to come from the file body (`_serial_from_bw_bytes`)
or from an explicit hint. Returns None when the filename doesn't
match the expected pattern.
""" """
if not name: if not name:
return None return None
@@ -842,5 +879,43 @@ def _serial_from_bw_filename(name: str) -> Optional[str]:
if prefix_letter < "B": if prefix_letter < "B":
return None return None
thousands = ord(prefix_letter) - ord("B") thousands = ord(prefix_letter) - ord("B")
serial_num = thousands * 1000 + int(base[1:4]) return thousands * 1000 + int(base[1:4])
return f"BE{serial_num}"
_BW_SERIAL_RE = re.compile(rb"[A-Z]{2}\d{3,6}")
def _serial_from_bw_bytes(data: bytes, name: str) -> Optional[str]:
"""
Read the real serial — prefix included — out of a BW file body.
The body carries the serial as a plain ASCII string ("BE9558",
"BA10895"). We accept a candidate only when its numeric part matches
the number the filename encodes, which keeps a stray byte sequence in
the sample stream from being mistaken for a serial.
Returns None when the filename number can't be derived or no
candidate in the body agrees with it — the caller then falls back.
"""
num = _serial_number_from_bw_filename(name)
if num is None or not data:
return None
for match in _BW_SERIAL_RE.findall(data):
candidate = match.decode("ascii", errors="replace")
if candidate[2:].lstrip("0") == str(num):
return candidate
return None
def _serial_from_bw_filename(name: str) -> Optional[str]:
"""
Best-effort serial from the filename alone.
⚠ The family prefix is a **guess** — the filename does not carry it.
"BE" is right for every MiniMate Plus but wrong for a BlastMate, whose
serials start "BA". Prefer `_serial_from_bw_bytes` whenever the file
body is at hand; this exists for callers that only have a name
(log lines, dry-run output).
"""
num = _serial_number_from_bw_filename(name)
return None if num is None else f"BE{num}"
+57 -19
View File
@@ -1,33 +1,71 @@
import datetime import sqlite3
from sfm.database import SeismoDb from sfm.database import SeismoDb
from minimateplus.models import Event, Timestamp from minimateplus.models import Event, Timestamp
def _ins(db, key, serial, pvs, ts): def _ins(db, key, serial, pvs, ts, record_type="Waveform"):
ev = Event(index=0) ev = Event(index=0)
ev._waveform_key = bytes.fromhex(key) ev._waveform_key = bytes.fromhex(key)
ev.timestamp = ts ev.timestamp = ts
# peak_vector_sum comes from peak_values; simplest: insert then UPDATE pvs directly
db.insert_events([ev], serial=serial) db.insert_events([ev], serial=serial)
row = [r for r in db.query_events(serial=serial) if r["waveform_key"] == key][0] row = [r for r in db.query_events(serial=serial) if r["waveform_key"] == key][0]
import sqlite3
with sqlite3.connect(db.db_path) as c: with sqlite3.connect(db.db_path) as c:
c.execute("UPDATE events SET peak_vector_sum=? WHERE id=?", (pvs, row["id"])) c.execute("UPDATE events SET peak_vector_sum=?, record_type=? WHERE id=?",
(pvs, record_type, row["id"]))
return row["id"] return row["id"]
def test_find_twins_matches_same_serial_pvs_near_time(tmp_path): def _ts(hour, minute, second=0, day=25):
return Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=day,
hour=hour, minute=minute, second=second)
def test_histogram_and_waveform_twin_across_hours(tmp_path):
# The real UM12947 case: histogram stamped at its 7pm interval start, the
# triggered waveform 75 min later — same serial + identical PVS. The old
# ±5-min window missed this; interval matching catches it, both directions.
db = SeismoDb(tmp_path / "s.db") db = SeismoDb(tmp_path / "s.db")
base = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=5) hist_pm = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 31, 17), "Histogram")
twin = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=45) wave = _ins(db, "01110002", "BE1", 0.4763, _ts(20, 46, 44), "Waveform")
far = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=21, minute=0, second=0) _ins(db, "01110003", "BE1", 0.0100, _ts(7, 0, 0, day=26), "Histogram") # bounds the interval
# d needs a timestamp distinct from `twin` (UNIQUE(serial, timestamp) would assert {r["id"] for r in db.find_twins(hist_pm)} == {wave}
# otherwise collide with b and UPSERT onto its row instead of inserting a assert {r["id"] for r in db.find_twins(wave)} == {hist_pm}
# new one) while staying near `base` in time.
near = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=44)
a = _ins(db, "01110001", "BE1", 0.4763, base) def test_same_type_not_twinned(tmp_path):
b = _ins(db, "01110002", "BE1", 0.4763, twin) # twin: same serial+pvs, 40s apart # Two waveforms, same serial + PVS, seconds apart → NOT twins (cross-type only).
c = _ins(db, "01110003", "BE1", 0.4763, far) # same pvs but >window away db = SeismoDb(tmp_path / "s.db")
d = _ins(db, "01110004", "BE1", 0.9999, near) # near time but different pvs a = _ins(db, "01110001", "BE1", 0.4763, _ts(20, 19, 5), "Waveform")
ids = {r["id"] for r in db.find_twins(a, window_seconds=300)} _ins(db, "01110002", "BE1", 0.4763, _ts(20, 19, 45), "Waveform")
assert ids == {b} assert db.find_twins(a) == []
def test_waveform_matches_only_the_containing_interval(tmp_path):
# Two overnight intervals with the same PVS; a waveform in the SECOND interval
# must twin with that histogram, never the first — even though PVS matches both.
db = SeismoDb(tmp_path / "s.db")
h1 = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 0, 0, day=25), "Histogram")
h2 = _ins(db, "01110002", "BE1", 0.4763, _ts(7, 0, 0, day=26), "Histogram")
w = _ins(db, "01110003", "BE1", 0.4763, _ts(8, 0, 0, day=26), "Waveform")
assert {r["id"] for r in db.find_twins(w)} == {h2}
assert w not in {r["id"] for r in db.find_twins(h1)}
def test_different_pvs_not_twinned(tmp_path):
db = SeismoDb(tmp_path / "s.db")
h = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 0, 0), "Histogram")
_ins(db, "01110002", "BE1", 0.9999, _ts(20, 0, 0), "Waveform") # different PVS
assert db.find_twins(h) == []
def test_open_ended_latest_interval(tmp_path):
# A waveform after the latest histogram (nothing bounds the interval) still twins.
db = SeismoDb(tmp_path / "s.db")
h = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 0, 0), "Histogram")
w = _ins(db, "01110002", "BE1", 0.4763, _ts(23, 30, 0), "Waveform")
assert {r["id"] for r in db.find_twins(h)} == {w}
def test_missing_fields_returns_empty(tmp_path):
db = SeismoDb(tmp_path / "s.db")
assert db.find_twins("nonexistent-id") == []
+103
View File
@@ -0,0 +1,103 @@
import sqlite3
from sfm.database import SeismoDb
from minimateplus.models import Event, Timestamp
def _ev(db, key="0111aaaa", serial="BE1"):
ev = Event(index=0)
ev._waveform_key = bytes.fromhex(key)
ev.timestamp = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0,
month=6, day=25, hour=8, minute=0, second=0)
ev.record_type = "Waveform"
db.insert_events([ev], serial=serial)
return [r for r in db.query_events(serial=serial) if r["waveform_key"] == key][0]["id"]
def test_flag_offset_reason_implies_ft(tmp_path):
db = SeismoDb(tmp_path / "s.db")
eid = _ev(db)
db.update_event_review(eid, {"false_trigger_reason": "offset"})
row = db.get_event(eid)
assert row["false_trigger"] == 1 # a reason is a subtype of FT
assert row["false_trigger_reason"] == "offset"
assert row["reviewed_real"] == 0
def test_plain_ft_leaves_reason_null(tmp_path):
# Reason is OPTIONAL — flagging FT without one records no reason.
db = SeismoDb(tmp_path / "s.db")
eid = _ev(db)
db.update_event_review(eid, {"false_trigger": True})
row = db.get_event(eid)
assert row["false_trigger"] == 1
assert row["false_trigger_reason"] is None
def test_confirm_real_clears_reason(tmp_path):
db = SeismoDb(tmp_path / "s.db")
eid = _ev(db)
db.update_event_review(eid, {"false_trigger_reason": "offset"})
db.update_event_review(eid, {"reviewed_real": True})
row = db.get_event(eid)
assert row["reviewed_real"] == 1
assert row["false_trigger"] == 0
assert row["false_trigger_reason"] is None
def test_clear_ft_clears_reason(tmp_path):
db = SeismoDb(tmp_path / "s.db")
eid = _ev(db)
db.update_event_review(eid, {"false_trigger_reason": "offset"})
db.update_event_review(eid, {"false_trigger": False})
row = db.get_event(eid)
assert row["false_trigger"] == 0
assert row["false_trigger_reason"] is None
def test_set_false_trigger_false_clears_reason(tmp_path):
db = SeismoDb(tmp_path / "s.db")
eid = _ev(db)
db.update_event_review(eid, {"false_trigger_reason": "offset"})
assert db.set_false_trigger(eid, False) is True
row = db.get_event(eid)
assert row["false_trigger"] == 0
assert row["false_trigger_reason"] is None
def test_reason_can_be_cleared_without_clearing_ft(tmp_path):
# Setting reason to None removes the reason but leaves the FT flag intact.
db = SeismoDb(tmp_path / "s.db")
eid = _ev(db)
db.update_event_review(eid, {"false_trigger_reason": "offset"})
db.update_event_review(eid, {"false_trigger_reason": None})
row = db.get_event(eid)
assert row["false_trigger"] == 1
assert row["false_trigger_reason"] is None
def _ts(h, m, d=25):
return Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0,
month=2, day=d, hour=h, minute=m, second=0)
def test_offset_reason_propagates_to_twin(tmp_path):
# Flag a waveform as offset → its histogram twin also becomes FT with reason=offset.
db = SeismoDb(tmp_path / "s.db")
def ins(key, ts, rt):
ev = Event(index=0); ev._waveform_key = bytes.fromhex(key); ev.timestamp = ts
db.insert_events([ev], serial="BE1")
rid = [r for r in db.query_events(serial="BE1") if r["waveform_key"] == key][0]["id"]
with sqlite3.connect(db.db_path) as c:
c.execute("UPDATE events SET peak_vector_sum=0.4763, record_type=? WHERE id=?", (rt, rid))
return rid
hist = ins("01110001", _ts(19, 31), "Histogram") # interval start
wave = ins("01110002", _ts(20, 46), "Waveform") # trigger inside the interval
db.update_event_review(wave, {"false_trigger_reason": "offset"})
db.propagate_review_to_twins(wave)
row = db.get_event(hist)
assert row["false_trigger"] == 1
assert row["false_trigger_reason"] == "offset"
+17
View File
@@ -0,0 +1,17 @@
"""The /health version must track the release, not a stale literal.
terra-view's SFM Admin page displays whatever `/health` reports. It was
hardcoded to "0.1.0" and never bumped, so the page showed 0.1.0 while the
service was actually 0.26.0. These guard against that regression — and run
without httpx (they call the endpoint function directly, no TestClient).
"""
from minimateplus.event_file_io import TOOL_VERSION
from sfm.server import app, health
def test_health_reports_current_tool_version():
assert health()["version"] == TOOL_VERSION
def test_openapi_version_matches_tool_version():
assert app.version == TOOL_VERSION
+35
View File
@@ -643,3 +643,38 @@ def test_multi_interval_matches_blastware_ascii_exactly():
assert hz is None assert hz is None
elif not cell.startswith("<"): elif not cell.startswith("<"):
assert hz is not None and abs(hz - float(cell)) <= max(0.55, float(cell) * 0.02) assert hz is not None and abs(hz - float(cell)) <= max(0.55, float(cell) * 0.02)
def test_partial_final_block_is_not_disqualified_by_missing_third_header():
"""A body can exceed two strides yet hold only two real blocks.
Regression for BE18193 `T193L0XM.CI0H` — 51 intervals at 2 s = one full
30-interval block plus a 21-interval remainder, in a body long enough to
demand a third block header at ``2 * stride`` that does not exist. The
third-block confirmation used to be mandatory whenever the body was long
enough, so the correct stride was discarded and the file decoded to
nothing. A missing third header means end-of-stream, not disqualification;
the block-counter check is the decisive anti-false-positive test.
"""
full = [(1, 1, 2, 2, 3, 3, 4, 4)] * 30
partial = [(5, 5, 6, 6, 7, 7, 8, 8)] * 21
body = (_mk_multi_block(full, ctr=256)
+ _mk_multi_block(partial, ctr=257)
+ b"\xff" * 700) # trailing padding past 2 * stride
stride = 12 + 20 * 30
assert 2 * stride + 6 <= len(body), "padding must reach past two strides"
# the whole point: a third header is absent, and that must not disqualify
assert detect_multi_interval_stride(body) == stride
recs = walk_multi_interval_blocks(body)
assert len(recs) == 51
assert recs[0]["t_peak"] == 1
assert recs[-1]["t_peak"] == 5
def test_third_block_still_rejects_a_mismatched_counter():
"""The corroboration must still bite when a third block IS present."""
ivs = [(1, 1, 2, 2, 3, 3, 4, 4)] * 4
body = (_mk_multi_block(ivs, ctr=256)
+ _mk_multi_block(ivs, ctr=257)
+ _mk_multi_block(ivs, ctr=999)) # counter jumps — not consecutive
assert detect_multi_interval_stride(body) != 12 + 20 * 4
+94
View File
@@ -0,0 +1,94 @@
import numpy as np
import h5py
from sfm.shape_metrics import offset_from_samples, offset_from_h5
def test_flags_constant_dc_floor():
# A geophone channel sitting at a constant +0.05 in/s across the whole record
# is a DC offset: baseline off zero AND flat across pre/mid/end thirds.
n = 300
chans = {"Tran": np.full(n, 0.05), "Vert": np.zeros(n), "Long": np.zeros(n)}
r = offset_from_samples(chans, pretrig_n=50)
assert r["offset"] is True
assert r["axis"] == "Tran"
assert abs(r["pre"] - 0.05) < 1e-6
assert r["spread"] < 0.02
def test_transient_rejected_by_spread():
# Off-zero pre-trigger but the baseline SETTLES back over the record — a
# transient, not a constant offset. The spread test must reject it.
x = np.concatenate([np.full(100, 0.05), np.full(100, 0.025), np.zeros(100)])
chans = {"Tran": x, "Vert": np.zeros(300), "Long": np.zeros(300)}
r = offset_from_samples(chans, pretrig_n=100)
assert r["offset"] is False
def test_clean_oscillation_not_offset():
t = np.arange(300)
x = 0.4 * np.sin(2 * np.pi * t / 20) # oscillates around zero — baseline IS zero
chans = {"Tran": x, "Vert": np.zeros(300), "Long": np.zeros(300)}
r = offset_from_samples(chans, pretrig_n=50)
assert r["offset"] is False
def test_below_floor_not_offset_but_reports_pre():
# A flat baseline below the floor is not an offset; still report the axis/pre
# for tuning transparency.
n = 300
chans = {"Tran": np.full(n, 0.01), "Vert": np.zeros(n), "Long": np.zeros(n)}
r = offset_from_samples(chans, pretrig_n=50)
assert r["offset"] is False
assert r["axis"] == "Tran"
assert abs(r["pre"] - 0.01) < 1e-6
def test_none_when_no_geo_channels():
assert offset_from_samples({"MicL": np.full(300, 0.05)}, pretrig_n=50) is None
def test_pretrig_fallback_when_invalid():
# pretrig_n of 0 (missing/unusable) falls back to the first third.
n = 300
chans = {"Tran": np.full(n, 0.05), "Vert": np.zeros(n), "Long": np.zeros(n)}
r = offset_from_samples(chans, pretrig_n=0)
assert r["offset"] is True
def test_flags_offset_on_any_axis():
# Offset on Vert alone still flags the event, and Vert is reported.
n = 300
chans = {"Tran": np.zeros(n), "Vert": np.full(n, -0.06), "Long": np.zeros(n)}
r = offset_from_samples(chans, pretrig_n=50)
assert r["offset"] is True
assert r["axis"] == "Vert"
def _write_h5(path, chans, pretrig_n):
with h5py.File(path, "w") as f:
g = f.create_group("samples")
for k, v in chans.items():
g.create_dataset(k, data=np.asarray(v, dtype="float32"))
if pretrig_n is not None:
f.attrs["pretrig_samples"] = pretrig_n
def test_offset_from_h5_reads_pretrig_attr(tmp_path):
p = tmp_path / "ev.h5"
n = 300
_write_h5(p, {"Tran": np.full(n, 0.05), "Vert": np.zeros(n), "Long": np.zeros(n)},
pretrig_n=50)
r = offset_from_h5(str(p))
assert r["offset"] is True and r["axis"] == "Tran"
def test_offset_from_h5_missing_pretrig_attr_falls_back(tmp_path):
p = tmp_path / "noattr.h5"
n = 300
_write_h5(p, {"Tran": np.full(n, 0.05), "Vert": np.zeros(n), "Long": np.zeros(n)},
pretrig_n=None)
assert offset_from_h5(str(p))["offset"] is True # falls back to first-third
def test_offset_from_h5_missing_file_is_none(tmp_path):
assert offset_from_h5(str(tmp_path / "nope.h5")) is None
+64
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@@ -0,0 +1,64 @@
from __future__ import annotations
from pathlib import Path
import numpy as np, h5py
from sfm.database import SeismoDb
from sfm.waveform_store import WaveformStore
from scripts.backfill_event_shape import backfill_shape
from minimateplus.models import Event, Timestamp, PeakValues
_FIX = Path(__file__).parent / "fixtures/histogram-extension-re/events-5-21-26/K558LL8B.7I0W"
def _event(waveform_key="0111abcd"):
ev = Event(index=0)
ev._waveform_key = bytes.fromhex(waveform_key)
ev.timestamp = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0,
month=6, day=25, hour=8, minute=50, second=0)
ev.record_type = "Waveform"
ev.peak_values = PeakValues(tran=0.075, vert=0.220, long=0.045,
peak_vector_sum=0.231, micl=0.01)
return ev
def test_insert_stores_offset_from_record(tmp_path: Path):
db = SeismoDb(tmp_path / "s.db")
ev = _event()
rec = {ev._waveform_key.hex(): {
"filename": "F.CE0W", "filesize": 10,
"shape_offset": 1, "shape_offset_axis": "Tran",
"shape_offset_pre": 0.05, "shape_offset_spread": 0.001}}
db.insert_events([ev], serial="BE1", waveform_records=rec)
row = db.query_events(serial="BE1")[0]
assert row["shape_offset"] == 1
assert row["shape_offset_axis"] == "Tran"
assert abs(row["shape_offset_pre"] - 0.05) < 1e-6
assert abs(row["shape_offset_spread"] - 0.001) < 1e-6
def test_save_imported_bw_attaches_offset(tmp_path: Path):
store = WaveformStore(tmp_path / "waveforms")
ev, rec = store.save_imported_bw(_FIX.read_bytes(), source_path=_FIX, serial_hint="BE9558")
assert rec["shape_offset"] in (0, 1)
assert rec["shape_offset_axis"] in ("Tran", "Vert", "Long")
assert "shape_offset_pre" in rec and "shape_offset_spread" in rec
def test_backfill_updates_offset(tmp_path: Path):
db = SeismoDb(tmp_path / "s.db")
store = WaveformStore(tmp_path / "waveforms")
ev = Event(index=0); ev._waveform_key = bytes.fromhex("0111abcd")
db.insert_events([ev], serial="BE1",
waveform_records={ev._waveform_key.hex(): {"filename": "F.CE0W", "filesize": 10}})
p = store.hdf5_path_for("BE1", "F.CE0W")
with h5py.File(p, "w") as f:
g = f.create_group("samples")
g.create_dataset("Tran", data=np.full(300, 0.05, "float32"))
g.create_dataset("Vert", data=np.zeros(300, "float32"))
g.create_dataset("Long", data=np.zeros(300, "float32"))
f.attrs["pretrig_samples"] = 50
backfill_shape(db, store)
row = db.query_events(serial="BE1")[0]
assert row["shape_offset"] == 1
assert row["shape_offset_axis"] == "Tran"
+101
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@@ -0,0 +1,101 @@
"""The BW filename encodes the serial NUMBER, never the family prefix.
"BE" is a MiniMate Plus; "BA" is a BlastMate. Both are Series III and their
files are byte-compatible — the whole archive's 1,493 BlastMate binaries
decode through the same codec at 100% — so the only thing that distinguishes
them downstream is the serial string, and that lives in the file body.
Synthesising the prefix as "BE" files a BlastMate under a unit that does not
exist. Four units in the DL2 archive are affected: BA9229, BA10060, BA10895
and BA15957.
"""
from __future__ import annotations
import pytest
from minimateplus.client import _decode_0a_partial_header
from sfm.waveform_store import (
_serial_from_bw_bytes,
_serial_from_bw_filename,
_serial_number_from_bw_filename,
)
# ── the filename gives a number, and only a number ──────────────────────────
@pytest.mark.parametrize("name,num", [
("P036L318.C80H", 14036), # BE14036
("H907KWRK.WB0H", 6907), # BE6907
("M529LKIQ.G10", 11529), # BE11529
("T003LQ9K.OE0H", 18003), # BE18003
("L895K63F.GE0W", 10895), # BA10895 — a BlastMate
("K229HGQI.XO0W", 9229), # BA9229 — a BlastMate
])
def test_number_from_filename(name, num):
assert _serial_number_from_bw_filename(name) == num
@pytest.mark.parametrize("name", ["", "not_a_bw_file.bin", "AB12", "1234ABCD.XX0W"])
def test_number_from_filename_rejects_junk(name):
assert _serial_number_from_bw_filename(name) is None
def test_filename_only_decoder_is_a_guess():
"""It still answers "BE" — that is why it must not be the first choice."""
assert _serial_from_bw_filename("L895K63F.GE0W") == "BE10895"
assert _serial_from_bw_filename("M529LKIQ.G10") == "BE11529"
assert _serial_from_bw_filename("nonsense") is None
# ── the body carries the truth ──────────────────────────────────────────────
def _body(serial: bytes) -> bytes:
return b"\x00" * 32 + b"STRT" + b"\xff\xfe" + serial + b"\x00Geo: 0.254 in/s\x00"
def test_body_wins_for_a_blastmate():
assert _serial_from_bw_bytes(_body(b"BA10895"), "L895K63F.GE0W") == "BA10895"
def test_body_wins_for_a_minimate():
assert _serial_from_bw_bytes(_body(b"BE11529"), "M529LKIQ.G10") == "BE11529"
def test_body_candidate_must_match_the_filename_number():
"""A serial-shaped byte run that disagrees with the filename is ignored."""
assert _serial_from_bw_bytes(_body(b"XX99999"), "L895K63F.GE0W") is None
def test_body_tolerates_a_leading_zero():
assert _serial_from_bw_bytes(_body(b"BA09229"), "K229HGQI.XO0W") == "BA09229"
@pytest.mark.parametrize("data,name", [
(b"", "L895K63F.GE0W"), # no bytes
(_body(b"BA10895"), "junk.bin"), # no derivable number
])
def test_body_returns_none_when_it_cannot_decide(data, name):
assert _serial_from_bw_bytes(data, name) is None
# ── the live monitor-log path ───────────────────────────────────────────────
def _partial_record(serial: bytes) -> bytes:
"""0x2C partial record: type, prefix, two 9-byte timestamps, then ASCII."""
ts = bytes([11, 0x10, 4, 0x07, 0xE9, 0, 16, 2, 0]) # 2025-04-11 16:02:00
return (bytes([0x2C]) + b"\x00" * 10 + ts + ts
+ b"\x00\x00\x00\x00" + serial + b"\x00Geo: 0.254 in/s\x00")
@pytest.mark.parametrize("serial", [b"BE11529", b"BA10895", b"UM11719"])
def test_monitor_log_reads_any_family_prefix(serial):
entry = _decode_0a_partial_header(_partial_record(serial), 0, b"\x01\x11\x00\x00")
assert entry is not None
assert entry.serial == serial.decode()
def test_monitor_log_geo_threshold_survives_a_blastmate():
"""The old find(b"BE") skipped the whole block, losing geo too."""
entry = _decode_0a_partial_header(_partial_record(b"BA10895"), 0, b"\x01\x11\x00\x00")
assert entry is not None
assert entry.geo_threshold_ips == pytest.approx(0.254)
+19 -16
View File
@@ -3,31 +3,34 @@ from sfm.database import SeismoDb
from minimateplus.models import Event, Timestamp from minimateplus.models import Event, Timestamp
def _ins(db, key, serial, pvs, ts): def _ins(db, key, serial, pvs, ts, record_type="Waveform"):
ev = Event(index=0) ev = Event(index=0)
ev._waveform_key = bytes.fromhex(key) ev._waveform_key = bytes.fromhex(key)
ev.timestamp = ts ev.timestamp = ts
# peak_vector_sum comes from peak_values; simplest: insert then UPDATE pvs directly
db.insert_events([ev], serial=serial) db.insert_events([ev], serial=serial)
row = [r for r in db.query_events(serial=serial) if r["waveform_key"] == key][0] row = [r for r in db.query_events(serial=serial) if r["waveform_key"] == key][0]
with sqlite3.connect(db.db_path) as c: with sqlite3.connect(db.db_path) as c:
c.execute("UPDATE events SET peak_vector_sum=? WHERE id=?", (pvs, row["id"])) c.execute("UPDATE events SET peak_vector_sum=?, record_type=? WHERE id=?",
(pvs, record_type, row["id"]))
return row["id"] return row["id"]
def test_propagate_copies_flags_to_twins(tmp_path): def _ts(hour, minute, second=0, day=25):
return Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=day,
hour=hour, minute=minute, second=second)
def test_propagate_copies_flags_across_hours_apart_twins(tmp_path):
# Flagging the waveform FT propagates to its histogram twin 75 min earlier
# (the interval matcher pairs them; the old ±5-min window would have missed it).
db = SeismoDb(tmp_path / "s.db") db = SeismoDb(tmp_path / "s.db")
base = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=5) hist = _ins(db, "01110001", "BE1", 0.4763, _ts(19, 31, 17), "Histogram")
twin = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=45) wave = _ins(db, "01110002", "BE1", 0.4763, _ts(20, 46, 44), "Waveform") # twin, 75 min later
other = Timestamp(raw=b"", flag=0x10, year=2026, unknown_byte=0, month=2, day=25, hour=20, minute=19, second=44) other = _ins(db, "01110003", "BE1", 0.9999, _ts(20, 20, 0), "Waveform") # different pvs
primary_id = _ins(db, "01110001", "BE1", 0.4763, base) db.update_event_review(wave, {"false_trigger": True})
twin_id = _ins(db, "01110002", "BE1", 0.4763, twin) # twin: same serial+pvs, 40s apart moved = db.propagate_review_to_twins(wave)
non_twin_id = _ins(db, "01110003", "BE1", 0.9999, other) # near time but different pvs
db.update_event_review(primary_id, {"false_trigger": True}) assert hist in moved
moved = db.propagate_review_to_twins(primary_id) assert db.get_event(hist)["false_trigger"] == 1
assert db.get_event(other)["false_trigger"] == 0
assert twin_id in moved
assert db.get_event(twin_id)["false_trigger"] == 1
assert db.get_event(non_twin_id)["false_trigger"] == 0